Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I22
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 47 6e-06
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 47 6e-06
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 45 3e-05
Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 40 7e-04
Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical pr... 36 0.020
AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine re... 32 0.24
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 31 0.57
AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical ... 31 0.57
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 31 0.57
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 29 1.3
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 29 1.3
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 29 1.3
Z19155-1|CAA79559.1| 397|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical pr... 28 3.0
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 28 3.0
AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical ... 28 3.0
AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical ... 28 3.0
AL021493-2|CAA16393.1| 382|Caenorhabditis elegans Hypothetical ... 27 7.0
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +1
Query: 244 RVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCN 423
RV T G GQLG+G+ + + T + + IV V AG HTI + G ++TFG
Sbjct: 787 RVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAF 846
Query: 424 DEGALGR 444
+G L R
Sbjct: 847 GKGQLAR 853
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 343 KIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 441
K+ V G HT+ L S +++TFG N G LG
Sbjct: 768 KVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLG 800
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +1
Query: 244 RVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCN 423
RV T G GQLG+G+ + + T + + IV V AG HTI + G ++TFG
Sbjct: 787 RVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAF 846
Query: 424 DEGALGR 444
+G L R
Sbjct: 847 GKGQLAR 853
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 343 KIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 441
K+ V G HT+ L S +++TFG N G LG
Sbjct: 768 KVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLG 800
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 238 RGRVLTCGQGDVGQLG--LGEDVVETTKFKYVTALGDK----IVDVQAGGMHTIALDSSG 399
R +L CG GQLG L E ++ + + + A D + V G HT+ L G
Sbjct: 2 RAELLGCGHTGEGQLGVRLSESTIQVPE-RIIGAPNDMDGTAVTSVTCGEQHTVFLTKDG 60
Query: 400 KIWTFGCNDEGALGRAT 450
K+W+ G N +G LGR +
Sbjct: 61 KMWSVGSNMDGQLGRGS 77
Score = 43.6 bits (98), Expect = 7e-05
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 235 KRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGD-KIVDVQAGGMHTIALDSSGKIWT 411
K G++ + G GQLG G + V+ KI+ + AG HT+++ G+++
Sbjct: 58 KDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFA 117
Query: 412 FGCNDEGALGRATSNXKDEGTP 477
+G N+ G LG S +GTP
Sbjct: 118 WGSNEHGQLG-MESKFTWQGTP 138
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 241 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWTFG 417
GR + G +GQ G G+ V + T V+ L G + + AG HTIA+ G + FG
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAI-CKGAPYPFG 319
Query: 418 CNDEGALG 441
N G LG
Sbjct: 320 LNSSGQLG 327
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 241 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTAL-GDKIVDVQAGGMHTIALDSSGKIWTFG 417
G V T GQ + G+LG+ +D+ T ++V + G +V+ G HT+ L G+ ++FG
Sbjct: 209 GAVFTWGQNNSGELGI-DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG 267
Query: 418 CNDEGALG 441
+ G G
Sbjct: 268 SDALGQCG 275
>Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical
protein K11D2.1 protein.
Length = 178
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 241 GRVLTCGQGDVGQLGLG--EDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTF 414
G + + G G G+LG+G V E + + +G +I V GG HT+AL G +T+
Sbjct: 100 GNLFSMGTGTRGELGVGLIRRVDEPVHIEQL--VGIRIKKVACGGWHTVALTEGGDAYTW 157
Query: 415 GCNDEGALGRATSN 456
G N G LG+ N
Sbjct: 158 GWNRYGQLGKDKVN 171
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 241 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 420
GRVL CG G GQ+G+ +D+ + F + ++ D+ H+I + +++ +G
Sbjct: 899 GRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGR 958
Query: 421 NDE 429
N +
Sbjct: 959 NPQ 961
Score = 34.3 bits (75), Expect = 0.046
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +1
Query: 241 GRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGC 420
G++ G GQ G+G V I + G H+ + S G +WTFG
Sbjct: 795 GQLSAWGGNRFGQCGVGHSF-RIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGW 853
Query: 421 NDEGALGRATSNXKDEGTP 477
G LG N ++ P
Sbjct: 854 GVWGQLGHGGRNNSNQLVP 872
>Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical
protein C26D10.1 protein.
Length = 569
Score = 35.5 bits (78), Expect = 0.020
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 343 KIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRAT 450
KIV + AG H + LD G + TFG + G LGR++
Sbjct: 301 KIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 262 QGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGM-HTIALDSSGKIWTFGCNDEGAL 438
+ DVGQ G + A G + V G+ H + L S GK++ G N + AL
Sbjct: 407 EADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNAL 466
Query: 439 GRATSNXKDE 468
G KD+
Sbjct: 467 GLGNWTGKDD 476
>AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 23 protein.
Length = 293
Score = 31.9 bits (69), Expect = 0.24
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 363 CLHINYFIAQCSHIFEFCSFHYVFSKAELA-NVSLSTCQNTSSLLWSSGYLQLYCSAF 193
CL Y I Q S I+ FC+F F + L S++ C SS W+ L ++ F
Sbjct: 132 CLIFGYAIFQYSFIYYFCNFELTFPRNCLTIGCSINAC---SSRFWTKSKLVIFVLTF 186
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 340 DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATS 453
+++VD G H+ + SG++ FG ND LG S
Sbjct: 700 ERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNS 737
>AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical
protein Y42G9A.6b protein.
Length = 547
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 405 NLSTAVQCYSVHATCLHINYFIAQCS-HIFEFCSFHYVFSKAELANVSLSTCQNTSSLLW 229
N++ Q VH CL +N F + S ++ ++ + AEL + +S TS L W
Sbjct: 333 NMAFMFQFSVVHHFCLEMNTFYRETSSRLYRVSAYFISKNLAELPSYIVSAVIFTSILYW 392
Query: 228 SSGYLQL 208
SG + +
Sbjct: 393 MSGLVPI 399
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 405 NLSTAVQCYSVHATCLHINYFIAQCS-HIFEFCSFHYVFSKAELANVSLSTCQNTSSLLW 229
N++ Q VH CL +N F + S ++ ++ + AEL + +S TS L W
Sbjct: 470 NMAFMFQFSVVHHFCLEMNTFYRETSSRLYRVSAYFISKNLAELPSYIVSAVIFTSILYW 529
Query: 228 SSGYLQL 208
SG + +
Sbjct: 530 MSGLVPI 536
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 333 CSHIFEFCSFHY---VFSKAELANVSLSTCQNTSSLLWSSGYLQLY 205
C+H ++ C HY V++K L S C++ +W G+ ++
Sbjct: 161 CNHAYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQG-VWGRGHRNVF 205
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 333 CSHIFEFCSFHY---VFSKAELANVSLSTCQNTSSLLWSSGYLQLY 205
C+H ++ C HY V++K L S C++ +W G+ ++
Sbjct: 161 CNHAYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQG-VWGRGHRNVF 205
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 333 CSHIFEFCSFHY---VFSKAELANVSLSTCQNTSSLLWSSGYLQLY 205
C+H ++ C HY V++K L S C++ +W G+ ++
Sbjct: 161 CNHAYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQG-VWGRGHRNVF 205
>Z19155-1|CAA79559.1| 397|Caenorhabditis elegans Hypothetical
protein F54G8.1 protein.
Length = 397
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 300 YVFSKAELANVSLSTCQNTSSL 235
Y FS L N+SL TC+N +SL
Sbjct: 285 YAFSNPLLTNLSLDTCENLNSL 306
>Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 340 DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 441
+ I+ + + +DSSG +++FG N++G G
Sbjct: 180 EPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCG 213
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 345 FIAQCSHIFEFCSFHYVFSKAELANVSLSTCQNTSS 238
F+ Q ++IFE CS HY F K +L C N S+
Sbjct: 275 FLFQMTNIFENCSTHYSFEK------NLQKCVNASN 304
>AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 340 DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 441
+ I+ + + +DSSG +++FG N++G G
Sbjct: 180 EPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCG 213
>AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 340 DKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALG 441
+ I+ + + +DSSG +++FG N++G G
Sbjct: 180 EPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCG 213
>AL021493-2|CAA16393.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2B.2 protein.
Length = 382
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 432 TFVITSKSP--NLSTAVQCYSVHATCLHINYFIAQCSHIFEFCSFHYVFSKAELA 274
TF+I++ + N+ A+ + T + YF+ S++ +FC + +FS +A
Sbjct: 118 TFIISASNLFINIPAALSLFPKEVTQSELFYFV---SYLIDFCHYSIIFSNLVIA 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.138 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,989,994
Number of Sequences: 27780
Number of extensions: 218659
Number of successful extensions: 691
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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