Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I19
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.6  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 245 YSRAFIILRVLCQILKYSKVNRRITKLSLKFKNKSVKV 358
           +S  F+I+R +C  L   KVN   T+  L   + S  V
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADV 361


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 245 YSRAFIILRVLCQILKYSKVNRRITKLSLKFKNKSVKV 358
           +S  F+I+R +C  L   KVN   T+  L   + S  V
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADV 361


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 316 YKTQFEIQKQKCESESCP 369
           Y    E Q+Q+C    CP
Sbjct: 477 YAKDLEKQRQQCNQNKCP 494


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 653 FLDCIMGLILPVGVLSIS 600
           FL  +  ++LP+G+L IS
Sbjct: 138 FLRSLFAIMLPLGILLIS 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,445
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)