Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I19
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi...    31   3.6  
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1...    31   3.6  
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ...    31   3.6  
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ...    31   3.6  
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ...    31   3.6  

>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
           type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 358 ESCPSAEALKKVIDTKXNIIGLVASTLTKLYETKNFDILTEAF--KILYKSNTTNPALLE 531
           E C S+    K        I     T +  Y    FD+L +A   ++   S   +P  ++
Sbjct: 161 EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIK 220

Query: 532 TEKLSPIAESRACNEKLREDSLNEIEST 615
           TEKL P   +R+   KL+  S++    T
Sbjct: 221 TEKLRPNKTARS-PPKLKNSSMDAPNQT 247


>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1
           gene for a DNA-binding protein. ).
          Length = 2717

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 358 ESCPSAEALKKVIDTKXNIIGLVASTLTKLYETKNFDILTEAF--KILYKSNTTNPALLE 531
           E C S+    K        I     T +  Y    FD+L +A   ++   S   +P  ++
Sbjct: 161 EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIK 220

Query: 532 TEKLSPIAESRACNEKLREDSLNEIEST 615
           TEKL P   +R+   KL+  S++    T
Sbjct: 221 TEKLRPNKTARS-PPKLKNSSMDAPNQT 247


>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 358 ESCPSAEALKKVIDTKXNIIGLVASTLTKLYETKNFDILTEAF--KILYKSNTTNPALLE 531
           E C S+    K        I     T +  Y    FD+L +A   ++   S   +P  ++
Sbjct: 161 EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIK 220

Query: 532 TEKLSPIAESRACNEKLREDSLNEIEST 615
           TEKL P   +R+   KL+  S++    T
Sbjct: 221 TEKLRPNKTARS-PPKLKNSSMDAPNQT 247


>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 358 ESCPSAEALKKVIDTKXNIIGLVASTLTKLYETKNFDILTEAF--KILYKSNTTNPALLE 531
           E C S+    K        I     T +  Y    FD+L +A   ++   S   +P  ++
Sbjct: 161 EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIK 220

Query: 532 TEKLSPIAESRACNEKLREDSLNEIEST 615
           TEKL P   +R+   KL+  S++    T
Sbjct: 221 TEKLRPNKTARS-PPKLKNSSMDAPNQT 247


>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 358 ESCPSAEALKKVIDTKXNIIGLVASTLTKLYETKNFDILTEAF--KILYKSNTTNPALLE 531
           E C S+    K        I     T +  Y    FD+L +A   ++   S   +P  ++
Sbjct: 161 EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIK 220

Query: 532 TEKLSPIAESRACNEKLREDSLNEIEST 615
           TEKL P   +R+   KL+  S++    T
Sbjct: 221 TEKLRPNKTARS-PPKLKNSSMDAPNQT 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,728,798
Number of Sequences: 237096
Number of extensions: 1705071
Number of successful extensions: 3789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3788
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)