Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I18
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           26   0.35 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 359 VDFLPFGPQDRPCSYRR 409
           + F+P+GPQ +P S  R
Sbjct: 73  IQFMPYGPQQQPASVAR 89



 Score = 25.4 bits (53), Expect = 0.46
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 569 QRRVFTTHMGFVITRDKTPASAAASMWRPGPS 474
           + RV   + GF   R   PAS AA+    GPS
Sbjct: 95  RNRVKQVNNGFATLRQHIPASVAAAFAPQGPS 126


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 269 GFDKNNDRCLRYLKAQLVDRDDPR*RVLGDVDFLPFGP 382
           G D+   RCL+   A+ +    PR +    + F  FGP
Sbjct: 249 GTDETMIRCLKSRPARQIALTVPRYQAWWYLPFAQFGP 286


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 1   AFGRPMRPPQSLV 39
           +FGRP   PQSL+
Sbjct: 247 SFGRPKMTPQSLL 259


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 368 KSRRRLKHVISDHPD 324
           KS  + K ++S+HPD
Sbjct: 205 KSSAKRKQLVSEHPD 219


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -2

Query: 623 TIPLYLLLSATCSSLYWRQRRVFTTHMGFVITRDKTPASAAASMWRPGPS 474
           T+ LY +L A C            +H   V+          A+   PGPS
Sbjct: 126 TLELYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPS 175


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -2

Query: 623 TIPLYLLLSATCSSLYWRQRRVFTTHMGFVITRDKTPASAAASMWRPGPS 474
           T+ LY +L A C            +H   V+          A+   PGPS
Sbjct: 126 TLELYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPS 175


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 572  SSTARSTWPTTRDTRGWST 628
            SST  S W TT  TR  +T
Sbjct: 1044 SSTTTSPWWTTTTTRRTTT 1062


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,409
Number of Sequences: 336
Number of extensions: 3530
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)