Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I16
         (857 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B63B2 Cluster: PREDICTED: similar to organic an...    41   0.046
UniRef50_Q0TZ66 Cluster: Putative uncharacterized protein; n=1; ...    38   0.43 
UniRef50_Q985S2 Cluster: Mlr7554 protein; n=1; Mesorhizobium lot...    36   1.3  
UniRef50_Q9GRZ1 Cluster: Putative uncharacterized protein ebp-1;...    35   3.0  
UniRef50_UPI0000F1ED40 Cluster: PREDICTED: similar to CG3047-PA;...    34   4.0  
UniRef50_Q9VS11 Cluster: CG14823-PA, isoform A; n=4; Sophophora|...    33   7.0  
UniRef50_Q93096 Cluster: Protein tyrosine phosphatase type IVA p...    33   9.2  

>UniRef50_UPI00015B63B2 Cluster: PREDICTED: similar to organic anion
            transporter; n=1; Nasonia vitripennis|Rep: PREDICTED:
            similar to organic anion transporter - Nasonia
            vitripennis
          Length = 992

 Score = 40.7 bits (91), Expect = 0.046
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 192  VVTLMEFRLDSAEYCQAQHK 251
            ++T MEF+LDSAEYCQAQHK
Sbjct: 973  ILTYMEFQLDSAEYCQAQHK 992


>UniRef50_Q0TZ66 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 582

 Score = 37.5 bits (83), Expect = 0.43
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +2

Query: 206 GVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTS 343
           G+P  QRG  P    ++R   R+  S RAPS+G   P  A+TR+ S
Sbjct: 143 GIPFHQRGPSPQPGHLSRPNSRDPHSGRAPSSGISAPSTALTRQPS 188


>UniRef50_Q985S2 Cluster: Mlr7554 protein; n=1; Mesorhizobium
           loti|Rep: Mlr7554 protein - Rhizobium loti
           (Mesorhizobium loti)
          Length = 575

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 116 FHRLNNFSFVLLTLFCLAEVSGDPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESR 286
           +H   NF    + LFCL  + G     + + +PLG  G+      +    FR GESR
Sbjct: 241 YHAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESR 297


>UniRef50_Q9GRZ1 Cluster: Putative uncharacterized protein ebp-1;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein ebp-1 - Caenorhabditis elegans
          Length = 316

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 306 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPDTSA 166
           GPA GA   +PSR     +  +P +T R P+ TP+  P + +P  S+
Sbjct: 143 GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSS 189


>UniRef50_UPI0000F1ED40 Cluster: PREDICTED: similar to CG3047-PA; n=2;
            Danio rerio|Rep: PREDICTED: similar to CG3047-PA - Danio
            rerio
          Length = 1428

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
 Frame = -3

Query: 777  RRXNVLXXHGHRCFSXXGRDRSRLGQSL-PHSAG-VTSL--HNRLTVPSQS---NRQTVT 619
            R    L  H HR  +     + R   SL PH    +TSL  H R T+ S S   +R T +
Sbjct: 1111 RTITSLSPHQHRTTTSLSPHQCRTITSLSPHQCRTITSLSPHQRRTITSLSPHQHRTTTS 1170

Query: 618  LFPHNTRQSRSFCFERVQLYNGNCPH*CR 532
            L PH  R + S    + +      PH CR
Sbjct: 1171 LSPHQHRTTTSLSPHQCRTITSLSPHQCR 1199


>UniRef50_Q9VS11 Cluster: CG14823-PA, isoform A; n=4;
           Sophophora|Rep: CG14823-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 263

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
 Frame = -1

Query: 308 WVQRMALSCSRLHGNTSCLFVLSLAVLRAVQAELHQCHH--RRDLQILPLGRIKLITQN* 135
           W +R    C+R   +T  +F+  L ++ A+   L Q HH  R  + +   G+++++ ++ 
Sbjct: 49  WTRRSC--CTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVEVLEEDF 106

Query: 134 SYST----DERTETICTRNKKLSL*TELKVRSLHCSGSTL--SVPRSC 9
              T    D +T TI T     +   E   + L C  +T   ++P  C
Sbjct: 107 PMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNIPAIC 154


>UniRef50_Q93096 Cluster: Protein tyrosine phosphatase type IVA
           protein 1 (EC 3.1.3.48) (Protein-tyrosine phosphatase
           4a1) (Protein-tyrosine phosphatase of regenerating liver
           1) (PRL-1) (PTP(CAAXI)); n=28; Bilateria|Rep: Protein
           tyrosine phosphatase type IVA protein 1 (EC 3.1.3.48)
           (Protein-tyrosine phosphatase 4a1) (Protein-tyrosine
           phosphatase of regenerating liver 1) (PRL-1)
           (PTP(CAAXI)) - Homo sapiens (Human)
          Length = 173

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 772 PAPSLIXYKGMRFLITDRPSDVSIQAYL 855
           PAP  + YK MRFLIT  P++ ++  ++
Sbjct: 7   PAPVEVTYKNMRFLITHNPTNATLNKFI 34


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,840,178
Number of Sequences: 1657284
Number of extensions: 16815701
Number of successful extensions: 46137
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46109
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)