Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I16
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    31   0.012
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   7.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   7.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   7.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 31.1 bits (67), Expect = 0.012
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 254  NRKCFREGESRRAPSAGPMLPVAAVTRRTSRTV 352
            N +C  +  S  APS  PM+P   VT  TSR +
Sbjct: 2281 NTECHPDASSTMAPSTTPMVPDKPVTTTTSRPI 2313


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 86  SCCACK*FQFFHRLNNFSFVLLTLF 160
           +CC+ K F+    + N   VLL LF
Sbjct: 106 NCCSKKSFRMNFAIFNLYMVLLLLF 130


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 231 TPRCPSGTPSMSPQKGSPDTSA 166
           TP+      SMSPQ  S + SA
Sbjct: 150 TPKTSPNEASMSPQSTSSNNSA 171


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 231 TPRCPSGTPSMSPQKGSPDTSA 166
           TP+      SMSPQ  S + SA
Sbjct: 170 TPKTSPNEASMSPQSTSSNNSA 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,786
Number of Sequences: 336
Number of extensions: 3875
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)