Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I15
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 84 5e-16
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 84 5e-16
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 84 5e-16
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 84 5e-16
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 84 5e-16
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 84 5e-16
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 82 2e-15
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 80 1e-14
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 80 1e-14
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 80 1e-14
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 80 1e-14
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 71 7e-12
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 57 9e-08
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 55 3e-07
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 48 6e-05
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 48 6e-05
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 48 6e-05
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 48 6e-05
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 48 6e-05
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 48 6e-05
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 48 6e-05
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 44 7e-04
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 44 7e-04
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 44 7e-04
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 40 0.015
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 840 PLS 848
PL+
Sbjct: 71 PLT 73
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 70.5 bits (165), Expect = 7e-12
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +3
Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 839
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 840 PLS 848
PL+
Sbjct: 80 PLT 82
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 56.8 bits (131), Expect = 9e-08
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3
Query: 729 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKFPLS 848
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL+
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLA 41
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3
Query: 729 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKFPLS 848
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPL+
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLT 41
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 33 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 92
Query: 661 LVTGF 647
L GF
Sbjct: 93 LRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 352 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 411
Query: 661 LVTGF 647
L GF
Sbjct: 412 LRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 33 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 92
Query: 661 LVTGF 647
L GF
Sbjct: 93 LRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 352 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 411
Query: 661 LVTGF 647
L GF
Sbjct: 412 LRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 33 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 92
Query: 661 LVTGF 647
L GF
Sbjct: 93 LRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 352 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 411
Query: 661 LVTGF 647
L GF
Sbjct: 412 LRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 47.6 bits (108), Expect = 6e-05
Identities = 30/65 (46%), Positives = 36/65 (55%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
GNLM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 352 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 411
Query: 661 LVTGF 647
L GF
Sbjct: 412 LRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
G LM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 33 GLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 92
Query: 661 LVTGF 647
L GF
Sbjct: 93 LRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
G LM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 352 GLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 411
Query: 661 LVTGF 647
L GF
Sbjct: 412 LRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSA 662
G LM S FLLG F GYLGCL +VLG RK ++ I L+ + F T AL +
Sbjct: 370 GLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS 429
Query: 661 LVTGF 647
L GF
Sbjct: 430 LRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 39.5 bits (88), Expect = 0.015
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2
Query: 841 GNLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 719
GNLM S FLLG F GYLGCL +VLG RK L +
Sbjct: 266 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,220,683
Number of Sequences: 237096
Number of extensions: 1135118
Number of successful extensions: 3010
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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