Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I14
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0128 + 995103-995174,996500-996606,996909-997041,997127-99... 303 7e-83
09_05_0013 + 20067115-20067183,20067585-20067691,20067905-200680... 294 5e-80
08_02_1460 + 27295201-27295269,27295968-27296074,27296252-272963... 262 2e-70
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 36 0.025
03_01_0165 + 1335444-1335747,1335890-1336167,1337440-1337496 33 0.17
04_04_1342 + 32775582-32775796,32776589-32776794,32777356-327774... 33 0.23
09_04_0494 + 18056679-18056819,18058307-18058374,18058708-180588... 33 0.31
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 30 1.6
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.8
01_01_0884 - 6956337-6956431,6956514-6957651 29 2.8
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 3.8
09_02_0290 - 6963673-6963966,6964279-6964590,6964693-6964832,696... 29 5.0
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877... 28 6.6
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 6.6
07_03_0591 + 19792694-19792738,19794190-19794509,19795104-197951... 28 8.7
01_06_1794 - 39919363-39920025 28 8.7
>03_01_0128 +
995103-995174,996500-996606,996909-997041,997127-997270,
997589-997747,997865-997938,998024-998099,998476-998531,
998651-998738,998824-998964,999057-999206,999320-999476,
1001183-1001773,1002673-1003532
Length = 935
Score = 303 bits (745), Expect = 7e-83
Identities = 140/220 (63%), Positives = 172/220 (78%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILAM++YFP V Q EL D VS GKYTIGLGQ M FC++ ED+ S+ LT + L
Sbjct: 8 VGILAMDIYFPPTCVLQDELENHDGVSKGKYTIGLGQDSMAFCTEVEDVISMSLTVVKSL 67
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
++ KI+ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NACYGGTAAL
Sbjct: 68 LENYKIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNACYGGTAAL 127
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FN +NWVES+SWDGR +VV D AVY +GPARPTGGA A+AMLIGP+AP+ F+ R S
Sbjct: 128 FNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPVSFESKYRGS 187
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M H YDFYKPDL+SE+P VDGKLS CYL AL +CYN+F
Sbjct: 188 HMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNVF 227
>09_05_0013 +
20067115-20067183,20067585-20067691,20067905-20068037,
20068163-20068306,20068415-20068573,20068710-20068783,
20068907-20068982,20069100-20069155,20069346-20069433,
20069508-20069648,20069737-20069886,20070165-20070398
Length = 476
Score = 294 bits (721), Expect = 5e-80
Identities = 136/220 (61%), Positives = 168/220 (76%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILAM++YFP V Q L D S GKYTIGLGQ M FCS+ ED+ S+ +T + L
Sbjct: 7 VGILAMDIYFPPTCVLQESLEAHDGASKGKYTIGLGQDCMAFCSEVEDVISMSMTVVTSL 66
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+ K K++ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NACYGGTAAL
Sbjct: 67 LKKYKVDPKLIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNACYGGTAAL 126
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
N +NWVES+SWDGR +VV D AVY +GPARPTGGA A+AMLIGP+AP+ F+ +AS
Sbjct: 127 LNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFESKYKAS 186
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M H YDFYKPDL+SE+P VDGKLS CYL AL +CY F
Sbjct: 187 HMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRQF 226
>08_02_1460 +
27295201-27295269,27295968-27296074,27296252-27296384,
27296621-27296714,27296828-27297030,27297167-27297240,
27297331-27297406,27297530-27297585,27297939-27298026,
27298115-27298255,27298338-27298487,27299015-27299221
Length = 465
Score = 262 bits (643), Expect = 2e-70
Identities = 128/222 (57%), Positives = 159/222 (71%), Gaps = 2/222 (0%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILAM++YFP V Q L D S GKYTIGLGQ M +CS+ ED+ S+ LT + L
Sbjct: 7 VGILAMDIYFPPACVHQEALEAHDGASKGKYTIGLGQDCMAYCSEVEDVISMSLTVVASL 66
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+ K I+ IGRLEVG+ET+IDKSKS+KT+LM +F + G TDIEG+D++NACYGGTAAL
Sbjct: 67 LKKYNIDPKQIGRLEVGSETVIDKSKSIKTWLMHIFEESGNTDIEGVDSSNACYGGTAAL 126
Query: 425 FNAINWVES--SSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVR 598
N +NWVE+ W I+ VY +GPARPTGGA A+AMLIGP+AP+ F+ R
Sbjct: 127 LNCVNWVETLLIQW----PILCNYYDQVYAEGPARPTGGAAAIAMLIGPNAPISFESKYR 182
Query: 599 ASYMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
AS+M H YDFYKPDL+SE+P VDGKLS CYL AL +CY +
Sbjct: 183 ASHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRQY 224
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 36.3 bits (80), Expect = 0.025
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 134 DEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRLIDKQKINLHDIGRLEVGTETIID 313
D V Y + +SK G D + + LIDK K+N ++G + VGT
Sbjct: 50 DVVIVAAYRTAICKSKRGGFKDTP-AEDLLVPVFKALIDKTKLNPSEVGDIVVGTVLAPG 108
Query: 314 KSKSVKTFLMTLFAKEGATDIEGIDTTN-ACYGGTAALFNAINWVESSSWD 463
++++ + +A G D + T N C G A+ N + +++ +D
Sbjct: 109 SQRAIECRMAAFYA--GFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYD 157
>03_01_0165 + 1335444-1335747,1335890-1336167,1337440-1337496
Length = 212
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +2
Query: 302 TIIDKSKSV--KTFLMTLFAKEGATDIEGIDTTNACYGGTAALFNAINWVESSSWDGRKA 475
++ID+++ ++ L+ L A A + + AC GG A L WV + G
Sbjct: 72 SLIDQARGFHFRSSLVDLPAVSAARSLLILCAYTACGGGAAYL-----WVAVACSVGSVC 126
Query: 476 IVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRASYMTHAY 622
VVA V+G P R G L+ +A + + A+++ AY
Sbjct: 127 YVVAKAAVVFGAAPDRAVLGLQGKGQLVAVEAMFLMSLALAAAHIAMAY 175
>04_04_1342 +
32775582-32775796,32776589-32776794,32777356-32777492,
32778758-32778860,32778961-32779079,32779282-32779346,
32779426-32779642,32779713-32779934
Length = 427
Score = 33.1 bits (72), Expect = 0.23
Identities = 30/133 (22%), Positives = 49/133 (36%)
Frame = +2
Query: 95 PSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRLIDKQKINLHD 274
PS V +L K E S G S E + + + A + ++ ++N D
Sbjct: 107 PSLSVSNDDLSKIVETSDEWIAARTGIRNRRVLSGNETLRELSVQAAKKALEMAQVNADD 166
Query: 275 IGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAALFNAINWVESS 454
+ + + T T D L A+ G + G D T AC G L A +++
Sbjct: 167 VDLVLLCTSTPDDLFGGAAQVL----AEVGCANAFGFDITAACSGFIIGLITATRFIKGG 222
Query: 455 SWDGRKAIVVAGD 493
R +V+ D
Sbjct: 223 GI--RNILVIGAD 233
>09_04_0494 +
18056679-18056819,18058307-18058374,18058708-18058811,
18058902-18058945
Length = 118
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 594 TPQSNTRGASGPINIATAPAPPVGLAGPFP*TAMSPATT 478
+P T GA+ A +PAPP G AG A +PATT
Sbjct: 4 SPWPPTTGAASAAAAAASPAPPEGAAGGAATPAAAPATT 42
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 600 ARTPQSNTRGASGPINIATAPAPPVGLAGPFP 505
AR N A+ PI +A PAPP AGP P
Sbjct: 13 ARLASRNLLRATRPIALAPPPAPPETFAGPGP 44
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -3
Query: 549 ATAPAPPVGLAGPFP*TAMSPATTMAFLPSQDEDSTQFMALKRAAVPP*QALVVSIPSMS 370
A APAP + L P P + +SP T P D+ A + P V PS
Sbjct: 225 APAPAPLLLLPAPPPSSDVSPVTVQVAAPPSSSDAAPVPATLLSDASPVIVQVPVPPSSD 284
Query: 369 VAP 361
AP
Sbjct: 285 AAP 287
>01_01_0884 - 6956337-6956431,6956514-6957651
Length = 410
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 515 PARPTGGAGAVAMLIGPDAPLVFDCGVRA 601
P +P A A A+ P P+V CGVRA
Sbjct: 277 PTQPPTAAAAAAVAPAPPQPVVVACGVRA 305
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -3
Query: 612 VMYEARTPQSNTRGASGPINIATAPAPPVGLAGPFP*TAMSPATTMAFLPSQDEDSTQFM 433
V+Y A P ++ +GA P + AP+P V + G + +P T A PS +
Sbjct: 72 VVYGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGY--ARSTPVTIRAPPPSHSSAPAPYQ 129
Query: 432 ALKRAAVP 409
A P
Sbjct: 130 PAAAAPAP 137
>09_02_0290 -
6963673-6963966,6964279-6964590,6964693-6964832,
6965124-6965187,6965263-6965493,6965580-6965714,
6966484-6966517,6966664-6966692
Length = 412
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 29 SILVNLGGKVXHVGILAMELYFPSQYVDQXELXKF 133
+++V G H G+ ++YFPSQY + L +
Sbjct: 181 AVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNY 215
>08_02_1402 -
26786011-26786128,26786263-26786516,26787505-26787732,
26788920-26789759
Length = 479
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Frame = -3
Query: 597 RTPQSNTRGASGPINIATAPAP---PVGLAGPFP*TA---MSPATTMAFLPSQ---DEDS 445
RTP+ + ASG + AP P A P P T+ M+PA + + DED
Sbjct: 206 RTPRRTSAAASGRLQEKQAPPPLPHAAATAAPLPYTSLLMMAPANCTELMENNRVGDEDE 265
Query: 444 TQFMALKRAAVPP*Q 400
+VPP Q
Sbjct: 266 NVLWESTAPSVPPTQ 280
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 603 EARTPQSNTRGASGPINIATAPAPPVGLA--GPFP*TAMSPATTMAFLPSQDE 451
EA P T G G +N+ APA P +A G A +PA A LPS +
Sbjct: 669 EAPPPAGPTAG--GDVNVEPAPAVPAAVAVNGVAGEDAAAPAPDAAALPSSSD 719
>07_03_0591 +
19792694-19792738,19794190-19794509,19795104-19795161,
19798000-19798056,19798373-19798440,19798454-19798543,
19798619-19798820,19798902-19798988,19799642-19799719,
19799815-19800040,19800260-19800483,19801988-19802014,
19802470-19802518,19802594-19802688,19802778-19802864,
19802973-19803100,19803198-19803294,19803563-19803788,
19803888-19804294
Length = 856
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 686 TVWIVFHLHKETLMINLACKSHMHVSCMKPALHNQTQG 573
T +I+FH+ E L++ C + A+ NQT G
Sbjct: 810 TSFIIFHVKNEFLLVTALCSMSFYNQARFDAVSNQTCG 847
>01_06_1794 - 39919363-39920025
Length = 220
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +2
Query: 374 IEGIDTTNACYGGTAALFNAINWVESSSWDGRKAIVVAGDIAVYGKGPARP-TGGAGAVA 550
+ G + YGG+ N+ + G AG + +YG G P GG G
Sbjct: 72 VVGYAASGGGYGGSTKANAGANYGGGGGY-GYNGGYNAGSVTLYGAGVGTPYYGGGGGGG 130
Query: 551 MLIGPDAPLVFDCGVRASYMT 613
G P GV A Y T
Sbjct: 131 YTGGGSVPYGGGGGVPAGYWT 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,185,845
Number of Sequences: 37544
Number of extensions: 390986
Number of successful extensions: 1232
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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