BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I14
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66435-1|CAA47061.1| 520|Homo sapiens Hydroxymethylglutaryl CoA... 354 2e-97
L25798-1|AAA62411.1| 520|Homo sapiens 3-hydroxy-3-methylglutary... 354 2e-97
BT007302-1|AAP35966.1| 520|Homo sapiens 3-hydroxy-3-methylgluta... 354 2e-97
BC083514-1|AAH83514.1| 520|Homo sapiens 3-hydroxy-3-methylgluta... 354 2e-97
BC000297-1|AAH00297.2| 555|Homo sapiens HMGCS1 protein protein. 354 2e-97
CR456850-1|CAG33131.1| 508|Homo sapiens HMGCS2 protein. 334 1e-91
X83618-1|CAA58593.1| 508|Homo sapiens hydroxymethylglutaryl-CoA... 332 6e-91
U81859-1|AAB72036.1| 508|Homo sapiens 3-hydroxy-3-methylglutary... 332 6e-91
BC044217-1|AAH44217.1| 508|Homo sapiens 3-hydroxy-3-methylgluta... 332 6e-91
AL589734-2|CAI22408.1| 508|Homo sapiens 3-hydroxy-3-methylgluta... 332 6e-91
AK095492-1|BAC04559.1| 509|Homo sapiens protein ( Homo sapiens ... 318 1e-86
U12789-1|AAA92674.1| 363|Homo sapiens HMG CoA synthase protein. 202 8e-52
U12788-1|AAA92673.1| 126|Homo sapiens HMG CoA synthase protein. 155 2e-37
>X66435-1|CAA47061.1| 520|Homo sapiens Hydroxymethylglutaryl CoA
Synthase protein.
Length = 520
Score = 354 bits (870), Expect = 2e-97
Identities = 158/220 (71%), Positives = 190/220 (86%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTTNACYGGTAA+
Sbjct: 77 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAV 136
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 137 FNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 196
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 197 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 236
>L25798-1|AAA62411.1| 520|Homo sapiens 3-hydroxy-3-methylglutaryl
coenzyme A synthase protein.
Length = 520
Score = 354 bits (870), Expect = 2e-97
Identities = 158/220 (71%), Positives = 190/220 (86%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTTNACYGGTAA+
Sbjct: 77 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAV 136
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 137 FNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 196
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 197 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 236
>BT007302-1|AAP35966.1| 520|Homo sapiens
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
(soluble) protein.
Length = 520
Score = 354 bits (870), Expect = 2e-97
Identities = 158/220 (71%), Positives = 190/220 (86%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTTNACYGGTAA+
Sbjct: 77 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAV 136
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 137 FNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 196
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 197 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 236
>BC083514-1|AAH83514.1| 520|Homo sapiens
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
(soluble) protein.
Length = 520
Score = 354 bits (870), Expect = 2e-97
Identities = 158/220 (71%), Positives = 190/220 (86%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTTNACYGGTAA+
Sbjct: 77 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAV 136
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 137 FNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 196
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 197 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 236
>BC000297-1|AAH00297.2| 555|Homo sapiens HMGCS1 protein protein.
Length = 555
Score = 354 bits (870), Expect = 2e-97
Identities = 158/220 (71%), Positives = 190/220 (86%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 52 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 111
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTTNACYGGTAA+
Sbjct: 112 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAV 171
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 172 FNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 231
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 232 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 271
>CR456850-1|CAG33131.1| 508|Homo sapiens HMGCS2 protein.
Length = 508
Score = 334 bits (822), Expect = 1e-91
Identities = 152/220 (69%), Positives = 182/220 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGIDTTNACYGGTA+L
Sbjct: 114 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 173
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA NW+ESSSWDGR A+VV GDIAVY G ARPTGGAGAVAMLIGP APL + G+R +
Sbjct: 174 FNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGT 233
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
YM + YDFYKP+L+SE+P VDGKLSIQCYL AL CY +
Sbjct: 234 YMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSY 273
>X83618-1|CAA58593.1| 508|Homo sapiens hydroxymethylglutaryl-CoA
synthase protein.
Length = 508
Score = 332 bits (817), Expect = 6e-91
Identities = 151/220 (68%), Positives = 182/220 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGIDTTNACYGGTA+L
Sbjct: 114 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 173
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA NW+ESSSWDGR A+VV GDIAVY G ARPTGGAGAVAMLIGP APL + G+R +
Sbjct: 174 FNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGT 233
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M + YDFYKP+L+SE+P VDGKLSIQCYL AL CY +
Sbjct: 234 HMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSY 273
>U81859-1|AAB72036.1| 508|Homo sapiens 3-hydroxy-3-methylglutaryl
CoA synthase protein.
Length = 508
Score = 332 bits (817), Expect = 6e-91
Identities = 151/220 (68%), Positives = 182/220 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGIDTTNACYGGTA+L
Sbjct: 114 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 173
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA NW+ESSSWDGR A+VV GDIAVY G ARPTGGAGAVAMLIGP APL + G+R +
Sbjct: 174 FNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGT 233
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M + YDFYKP+L+SE+P VDGKLSIQCYL AL CY +
Sbjct: 234 HMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSY 273
>BC044217-1|AAH44217.1| 508|Homo sapiens
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
(mitochondrial) protein.
Length = 508
Score = 332 bits (817), Expect = 6e-91
Identities = 151/220 (68%), Positives = 182/220 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGIDTTNACYGGTA+L
Sbjct: 114 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 173
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA NW+ESSSWDGR A+VV GDIAVY G ARPTGGAGAVAMLIGP APL + G+R +
Sbjct: 174 FNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGT 233
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M + YDFYKP+L+SE+P VDGKLSIQCYL AL CY +
Sbjct: 234 HMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSY 273
>AL589734-2|CAI22408.1| 508|Homo sapiens
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
(mitochondrial) protein.
Length = 508
Score = 332 bits (817), Expect = 6e-91
Identities = 151/220 (68%), Positives = 182/220 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 54 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 113
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGIDTTNACYGGTA+L
Sbjct: 114 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 173
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
FNA NW+ESSSWDGR A+VV GDIAVY G ARPTGGAGAVAMLIGP APL + G+R +
Sbjct: 174 FNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGT 233
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M + YDFYKP+L+SE+P VDGKLSIQCYL AL CY +
Sbjct: 234 HMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSY 273
>AK095492-1|BAC04559.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ38173 fis, clone FCBBF1000053, highly similar to
HYDROXYMETHYLGLUTARYL-COA SYNTHASE, CYTOPLASMIC (EC
4.1.3.5). ).
Length = 509
Score = 318 bits (781), Expect = 1e-86
Identities = 148/220 (67%), Positives = 179/220 (81%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGI+A+E+YFPSQYVDQ EL K+D V GKYTIGLGQ+KMGFC+DREDINS+C+T + L
Sbjct: 17 VGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNL 76
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGTAAL 424
+++ ++ IGRLEVGTETIIDKSKSVKT LM LF + G TDIEGIDTT
Sbjct: 77 MERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTT---------- 126
Query: 425 FNAINWVESSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDAPLVFDCGVRAS 604
NA+NW+ESSSWDGR A+VVAGDIAVY G ARPTGG GAVA+LIGP+APL+F+ G+R +
Sbjct: 127 -NAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGT 185
Query: 605 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALXNCYNLF 724
+M HAYDFYKPD+ SE+P VDGKLSIQCYL+AL CY+++
Sbjct: 186 HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 225
>U12789-1|AAA92674.1| 363|Homo sapiens HMG CoA synthase protein.
Length = 363
Score = 202 bits (494), Expect = 8e-52
Identities = 92/128 (71%), Positives = 104/128 (81%)
Frame = +2
Query: 341 MTLFAKEGATDIEGIDTTNACYGGTAALFNAINWVESSSWDGRKAIVVAGDIAVYGKGPA 520
M LF G TDIEGIDTTNACYGGTA+LFNA NW+ESSSWDGR A+VV GDIAVY G A
Sbjct: 1 MELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNA 60
Query: 521 RPTGGAGAVAMLIGPDAPLVFDCGVRASYMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNA 700
RPTGGAGAVAMLIGP APL + G+R ++M + YDFYKP+L+SE+P VDGKLSIQCYL A
Sbjct: 61 RPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRA 120
Query: 701 LXNCYNLF 724
L CY +
Sbjct: 121 LDRCYTSY 128
>U12788-1|AAA92673.1| 126|Homo sapiens HMG CoA synthase protein.
Length = 126
Score = 155 bits (375), Expect = 2e-37
Identities = 70/108 (64%), Positives = 89/108 (82%)
Frame = +2
Query: 65 VGILAMELYFPSQYVDQXELXKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTALHRL 244
VGILA+E+YFP+QYVDQ +L K++ V GKYT+GLGQ++MGFCS +EDINS+CLT + RL
Sbjct: 19 VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRL 78
Query: 245 IDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGID 388
+++ ++ +GRLEVGTETIIDKSK+VKT LM LF G TDIEGID
Sbjct: 79 MERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGID 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,185,367
Number of Sequences: 237096
Number of extensions: 2314287
Number of successful extensions: 6011
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6002
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -