Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I14
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 5.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 6.8
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 6.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.8
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 9.0
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 224 LTALHR-LIDKQK-INLHDIGRLEVGTETIIDKSKSVKT 334
LTAL R +I +Q IN+ IG + G TI+ V+T
Sbjct: 29 LTALSREVISRQATINIGTIGHVAHGKSTIVKAISGVQT 67
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 273 SCKLIFCLSISLCKAVR 223
SCK I+ SI+LC A R
Sbjct: 182 SCKCIYVQSINLCMAGR 198
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 470 KAIVVAGDIAVYGKGPARPTGGA 538
+++V+ GDI + G P GGA
Sbjct: 49 ESVVIPGDIVLGGLFPVHEKGGA 71
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 466 QEGHSCCW*HCCLWKGPCETYRWCW 540
Q+G +CCW C CE Y + +
Sbjct: 551 QQGDTCCW--VC---DQCEEYEYVY 570
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 97 NYNNYNKHNYNKLY 110
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 302 FLCPPPSVQYH 270
FL PPP++ YH
Sbjct: 319 FLPPPPNLDYH 329
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 330 NYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 719 NYNNYXKH*GNTVW 678
NYNNY KH N ++
Sbjct: 330 NYNNYNKHNYNKLY 343
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 446 ESSSWDGRKAIVVAGDIAVYG 508
E SW +K VV GD+ + G
Sbjct: 101 EQMSWPVKKEAVVEGDLVLGG 121
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 435 MALKRAAVPP*QALVVSIPSMSVAPSL 355
M + +PP LV S S+S PS+
Sbjct: 137 MTFDQTGIPPTTCLVFSSGSVSCVPSV 163
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 458 WDGRKAIVVAGDIAVYGKGPARPTGGAGAV--AMLIGP 565
W + + G + + G G GG+ A+ A+++GP
Sbjct: 167 WGDQGFLKKLGAVDIAGSGAVHLVGGSSALACAIMLGP 204
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 578 VFDCGVRASYMTHAYDFYKPDLSSE 652
+ D + S TH YD Y + E
Sbjct: 789 ISDIALYPSQTTHGYDIYASSIDKE 813
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 515 PARPTGGAGAVAMLIGPDAPLVFD 586
P RP+GGA A++ + FD
Sbjct: 16 PQRPSGGADKDAVITSQQLEVNFD 39
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,525
Number of Sequences: 438
Number of extensions: 4777
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -