Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I13
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   2.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   2.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   5.8  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 229 SFIMLLKSVWLSRYISAIKN 288
           +F+MLL +VW  +Y +   N
Sbjct: 6   AFLMLLGAVWCEQYTTKYDN 25


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -1

Query: 401 VENYNVFVIKCLHIMQRVLVATLNKAQKDAKFSNSY 294
           +ENY  F+  C H    +++ +  +  K   + N Y
Sbjct: 138 IENYCQFLYNCFHSTLLLMILSRYQRLKAQLWQNRY 173


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 134 HYCYPXEIMRFWVTPFF 184
           H+ YP   M F+V  FF
Sbjct: 111 HFYYPVATMSFYVLNFF 127


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 202 FKYQ*HTNTSFIMLLKSVWLSRYISAIKNC 291
           F Y   T  +   L+ + W+S +   + NC
Sbjct: 292 FAYVTRTGANIKKLIVNTWISLFCVKVTNC 321


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +1

Query: 52  FGFHYTENGDKLLHV 96
           +G+HY+ +G ++ H+
Sbjct: 391 YGYHYSGDGGEVAHL 405


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +1

Query: 52  FGFHYTENGDKLLHV 96
           +G+HY+ +G ++ H+
Sbjct: 339 YGYHYSGDGGEVAHL 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,463
Number of Sequences: 336
Number of extensions: 1969
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)