Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_I09
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 30 1.8
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 30 1.8
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 28 5.4
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 28 5.4
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 28 7.1
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 28 7.1
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +2
Query: 470 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMP 631
++CV P ++A +C +CPE C PSVP +G+C+A C P + DV P
Sbjct: 778 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 837
Query: 632 KCSN 643
CS+
Sbjct: 838 SCSS 841
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +2
Query: 470 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMP 631
++CV P ++A +C +CPE C PSVP +G+C+A C P + DV P
Sbjct: 569 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 628
Query: 632 KCSN 643
CS+
Sbjct: 629 SCSS 632
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical protein
T04A8.14 protein.
Length = 1521
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 104 VYCGXLPNTXYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 283
V C P +C G KI +VSEK + + D +R + WA+ +D +V D
Sbjct: 988 VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 104 VYCGXLPNTXYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 283
V C P +C G KI +VSEK + + D +R + WA+ +D +V D
Sbjct: 988 VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 104 VYCGXLPNTXYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 283
V C P +C G KI +VSEK + + D +R + WA+ +D +V D
Sbjct: 988 VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 28.3 bits (60), Expect = 5.4
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Frame = +2
Query: 77 VATSQXQPRVYCGXLPNTXYSCLGNPKIIQPEVS-EKCNKPISECDKTRCIFKESGWAKN 253
V Q RVY G LP+ L K ++PE N+ + +K + K K
Sbjct: 255 VCPDQTADRVYLGLLPSCRAHWLAACKALKPEGGIVHINEILDMTEKKKTPQKTEKVEKK 314
Query: 254 NVID-KKKVSDYFEQFAKDNPDWSAAVQNFKT----TCLSDSLKPQGVDTNCP 397
V + KKK +D E+ KD V KT + + + KP+ T+ P
Sbjct: 315 VVAEKKKKPADGKEKTDKDAAPKKKKVLRQKTLPVLSAVHEDSKPEVESTSIP 367
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 191 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 319
+ I++ D R + W K N D+ YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 191 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 319
+ I++ D R + W K N D+ YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 191 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 319
+ I++ D R + W K N D+ YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 191 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 319
+ I++ D R + W K N D+ YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 125 NTXYSCLG--NPKIIQPEVSEKCNKPISECDKT-RCIFKESGWAKNNVI 262
NT Y C+G PK ++ V N P +C T + E+G+A +VI
Sbjct: 251 NTVYQCIGQPTPKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDVI 299
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 167 PEVSEKCNKPISECDKT 217
P +SE +KPISEC KT
Sbjct: 42 PSISETGHKPISECGKT 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,341
Number of Sequences: 27780
Number of extensions: 339496
Number of successful extensions: 1051
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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