Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I07
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071395-1|AAL49017.1|  502|Drosophila melanogaster RE46851p pro...    38   0.006
AF045015-1|AAC05669.1|  502|Drosophila melanogaster nuclear fall...    38   0.006
AE014296-2367|ABC66147.1|  502|Drosophila melanogaster CG33991-P...    38   0.006
AE014296-2366|AAF49749.1|  502|Drosophila melanogaster CG33991-P...    38   0.006
BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p pro...    32   0.28 
AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-P...    32   0.28 
AY060599-1|AAL28147.1|  578|Drosophila melanogaster GH01794p pro...    29   2.6  
AE014296-745|AAF47828.1|  578|Drosophila melanogaster CG1135-PA ...    29   2.6  

>AY071395-1|AAL49017.1|  502|Drosophila melanogaster RE46851p
           protein.
          Length = 502

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 211 RKRPYSSGKRQIGSNVLASQLYR 279
           R+ P SSG+RQI SN LASQLYR
Sbjct: 157 RRTPTSSGRRQISSNALASQLYR 179


>AF045015-1|AAC05669.1|  502|Drosophila melanogaster nuclear fallout
           protein.
          Length = 502

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 211 RKRPYSSGKRQIGSNVLASQLYR 279
           R+ P SSG+RQI SN LASQLYR
Sbjct: 157 RRTPTSSGRRQISSNALASQLYR 179


>AE014296-2367|ABC66147.1|  502|Drosophila melanogaster CG33991-PC,
           isoform C protein.
          Length = 502

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 211 RKRPYSSGKRQIGSNVLASQLYR 279
           R+ P SSG+RQI SN LASQLYR
Sbjct: 157 RRTPTSSGRRQISSNALASQLYR 179


>AE014296-2366|AAF49749.1|  502|Drosophila melanogaster CG33991-PA,
           isoform A protein.
          Length = 502

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 211 RKRPYSSGKRQIGSNVLASQLYR 279
           R+ P SSG+RQI SN LASQLYR
Sbjct: 157 RRTPTSSGRRQISSNALASQLYR 179


>BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p
           protein.
          Length = 1102

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 244 SVASPSCRDAFCNACKHRYAP 182
           SV  PSC+D FC  CK  Y P
Sbjct: 932 SVHCPSCKDEFCGLCKKAYHP 952


>AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-PA
           protein.
          Length = 1102

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 244 SVASPSCRDAFCNACKHRYAP 182
           SV  PSC+D FC  CK  Y P
Sbjct: 932 SVHCPSCKDEFCGLCKKAYHP 952


>AY060599-1|AAL28147.1|  578|Drosophila melanogaster GH01794p
           protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
 Frame = -2

Query: 357 PRAKHLSTC--RRQLPARPAAGRVERR--RPV-QLAC*DIGTNLSLPRAVGTLSVMHVNT 193
           P A   ST   RR  P RPA+ + +RR  RP+ Q+A  D+G    +      + +   N 
Sbjct: 205 PPAMERSTTSERRSRPVRPASKKAQRRNGRPMGQMATKDLGRWKPIDDLALIIGIQQTND 264

Query: 192 VTL-----QLYVKFCLQLKHTRWF 136
           + +     +   KF LQ    RW+
Sbjct: 265 LRIIHRGVKFSCKFTLQELQQRWY 288


>AE014296-745|AAF47828.1|  578|Drosophila melanogaster CG1135-PA
           protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
 Frame = -2

Query: 357 PRAKHLSTC--RRQLPARPAAGRVERR--RPV-QLAC*DIGTNLSLPRAVGTLSVMHVNT 193
           P A   ST   RR  P RPA+ + +RR  RP+ Q+A  D+G    +      + +   N 
Sbjct: 205 PPAMERSTTSERRSRPVRPASKKAQRRNGRPMGQMATKDLGRWKPIDDLALIIGIQQTND 264

Query: 192 VTL-----QLYVKFCLQLKHTRWF 136
           + +     +   KF LQ    RW+
Sbjct: 265 LRIIHRGVKFSCKFTLQELQQRWY 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,430,373
Number of Sequences: 53049
Number of extensions: 357734
Number of successful extensions: 904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)