Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I06
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    69   2e-10
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    50   8e-05
UniRef50_UPI00006CB0E2 Cluster: hypothetical protein TTHERM_0061...    33   7.2  
UniRef50_Q4N5T1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 68.5 bits (160), Expect = 2e-10
 Identities = 34/56 (60%), Positives = 40/56 (71%)
 Frame = -2

Query: 407 LADPADFVVPQSINKRPKLLYKINLKQTKGIPVRRGTHQRKNSIVIFI*FRTFPYL 240
           LADPADFVVPQSINKRPK LYKINLKQTKGI     T + K +   ++  R F ++
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77



 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = -1

Query: 309 QTGDTSKEKQYCYFYLIPNISIFI 238
           QTGDTSKEKQ CYFYLIP I IFI
Sbjct: 54  QTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 49.6 bits (113), Expect = 8e-05
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +2

Query: 155 LKLENGWTDLANFGLELFVEVQRRFK 232
           LKLENGWTDLANFGLEL VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_UPI00006CB0E2 Cluster: hypothetical protein
           TTHERM_00614680; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00614680 - Tetrahymena
           thermophila SB210
          Length = 386

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = -2

Query: 482 HIISMRRRL-FGVSDIFVNLLEIYLKL--ADPADFVVPQSINKRPKLLYKINLKQTKGI 315
           H++  RR + FGV++I + +LEIY KL   D  DF     +   PK+  ++N + TK +
Sbjct: 257 HVLYWRRNVWFGVNNI-IKVLEIYPKLNFVDDCDFFEGAILANIPKVKTQLNEQNTKAL 314


>UniRef50_Q4N5T1 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 261

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 310 SDGGHIKGKTVLLFLFNSEHFHIYLPFKPSLDFHK*FKTKIS 185
           S+GG  + K V+++ + S+H   Y+ F PS D  K +K K++
Sbjct: 77  SNGGPNRVKNVVVYSYGSKHMLCYIIFFPSNDLTKFYKKKMN 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,513,093
Number of Sequences: 1657284
Number of extensions: 10887206
Number of successful extensions: 23373
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23365
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)