Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I06
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical ...    30   1.5  
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical
           protein F57H12.4 protein.
          Length = 454

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +2

Query: 341 FYTKA*VFYLSIEALRSLPGQLVLNISPVNLQKCRLRQTAFDASILCDNRLN 496
           FY +  +FYL +  ++ +P  L++ ++ + + K RL   A +A +    +LN
Sbjct: 220 FYIEFYLFYLYVTFIQLIPWTLIIFLNAIIIHKVRLAYRAQEAMVHNSGKLN 271


>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
           protein C16A3.3 protein.
          Length = 1743

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 368 LSIEALRSLPGQLVLNISPVNLQ-KCRLRQTAFDASILCDNRLNLVCTC 511
           LS+ + + LP Q + NI  V  + KCR+ Q       +CD R NL+ TC
Sbjct: 458 LSMLSDKPLPAQKMKNIYKVGTEVKCRVWQ-------ICDERKNLIVTC 499


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 449 VSDIFVNLLEIYLKLADPADFVVPQSINKRPKLLYKINLKQTKGIPVRRGTHQ 291
           V+ +   LL  Y +LA PA       I   P L Y+IN  Q  G      TH+
Sbjct: 478 VNKVAAPLLPAYQQLAAPATRRDADKIVNLPGLTYQINFNQYSGYLNASDTHR 530


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 449 VSDIFVNLLEIYLKLADPADFVVPQSINKRPKLLYKINLKQTKGIPVRRGTHQ 291
           V+ +   LL  Y +LA PA       I   P L Y+IN  Q  G      TH+
Sbjct: 478 VNKVAAPLLPAYQQLAAPATRRDADKIVNLPGLTYQINFNQYSGYLNASDTHR 530


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 449 VSDIFVNLLEIYLKLADPADFVVPQSINKRPKLLYKINLKQTKGIPVRRGTHQ 291
           V+ +   LL  Y +LA PA       I   P L Y+IN  Q  G      TH+
Sbjct: 478 VNKVAAPLLPAYQQLAAPATRRDADKIVNLPGLTYQINFNQYSGYLNASDTHR 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,476,349
Number of Sequences: 27780
Number of extensions: 272149
Number of successful extensions: 570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)