Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I04
         (348 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    83   1e-15
UniRef50_A5K998 Cluster: Putative uncharacterized protein; n=1; ...    33   1.4  
UniRef50_A4J380 Cluster: YD repeat protein; n=1; Desulfotomaculu...    32   3.1  
UniRef50_Q7SXN4 Cluster: Cytoplasmic polyadenylation element-bin...    32   3.1  
UniRef50_A5BTA1 Cluster: Putative uncharacterized protein; n=2; ...    31   4.1  
UniRef50_Q7RYB7 Cluster: Predicted protein; n=1; Neurospora cras...    31   4.1  
UniRef50_UPI0000DB6F0C Cluster: PREDICTED: similar to zinc finge...    31   7.2  
UniRef50_Q0IBD7 Cluster: Phosphatidate cytidylyltransferase; n=2...    31   7.2  
UniRef50_A4XRA4 Cluster: Drug resistance transporter, Bcr/CflA s...    31   7.2  
UniRef50_A3LST1 Cluster: Predicted protein; n=1; Pichia stipitis...    30   9.5  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 83.4 bits (197), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = +2

Query: 11  MGFFTALIVNIVGGAVLC-MGGFLIPIVAPLLGFXXXXXXXXXXXXXXXXYYGNLMAGSI 187
           MG   AL VN+VGGA++   GG L PIVAP+LGF                YYGN++AGS+
Sbjct: 1   MGLLAALAVNLVGGAIIYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSV 60

Query: 188 ISKLTAAAMIAPTP 229
           IS+LT+AAM+APTP
Sbjct: 61  ISQLTSAAMLAPTP 74


>UniRef50_A5K998 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 665

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 166 EFNGRKHYIKVDCRRHDSTNSISLSKTDNC 255
           EFNGR HY+ V  +  DST+++  +   NC
Sbjct: 593 EFNGRTHYVLVLSKGGDSTDAVHYTMRQNC 622


>UniRef50_A4J380 Cluster: YD repeat protein; n=1; Desulfotomaculum
            reducens MI-1|Rep: YD repeat protein - Desulfotomaculum
            reducens MI-1
          Length = 2558

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 8    IMGFFTALIVNIVGGAVLCMGGFLIPIVAPLLG 106
            + G  TAL V ++GGA +  G +  P+VA L G
Sbjct: 2255 LYGGLTALAVGLIGGAAVGTGDYASPVVAALAG 2287


>UniRef50_Q7SXN4 Cluster: Cytoplasmic polyadenylation
           element-binding protein 4; n=20; Euteleostomi|Rep:
           Cytoplasmic polyadenylation element-binding protein 4 -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 635

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 10  HGXFHCPNSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGK 135
           H  F  P++QHRR S S H   F        +L  +GNN  K
Sbjct: 169 HPHFQHPHNQHRRSSASPHPPPFSHRSAAFNQLPHLGNNLSK 210


>UniRef50_A5BTA1 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 538

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
 Frame = +1

Query: 34  SQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSPVV--LREFNGRKHYIKVDCR 207
           +++R+  ++LH  +F+   G ++ LQ+I  N GK   F+ ++  LR  + RK Y++V  +
Sbjct: 281 TENRKADKALHTLMFEKLEGDTSILQKI-RNSGKEDLFAELLCFLRFGSLRKSYLQVTSQ 339

Query: 208 R 210
           R
Sbjct: 340 R 340


>UniRef50_Q7RYB7 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 247

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 29  LIVNIVGGAVLCMGGFLIPIVAPLLGFXXXXXXXXXXXXXXXXYYGNLMAGSIISKLTAA 208
           +++ + G  +L + G L+  +   LGF                  G++ AGS  + LT+A
Sbjct: 151 IVLGVTGIVILAVPGLLMTPILSGLGFGASGIAAGSMAAAIQSGIGSVAAGSAFAGLTSA 210

Query: 209 AM 214
           AM
Sbjct: 211 AM 212


>UniRef50_UPI0000DB6F0C Cluster: PREDICTED: similar to zinc finger
           protein 111; n=1; Apis mellifera|Rep: PREDICTED: similar
           to zinc finger protein 111 - Apis mellifera
          Length = 878

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 31  NSQHRRRSRSLHGRVFDPNRGTSARLQRIGNNGGKHCSFSP 153
           +S+ R     L  R+ D N GT+   Q+IG   G   S+SP
Sbjct: 734 HSRVRTMYERLQDRIHDNNNGTTGSGQKIGRGTGSRRSYSP 774


>UniRef50_Q0IBD7 Cluster: Phosphatidate cytidylyltransferase; n=20;
           Cyanobacteria|Rep: Phosphatidate cytidylyltransferase -
           Synechococcus sp. (strain CC9311)
          Length = 306

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 153 WAEAAMLPAIIPDALKPSRGATI 85
           WA +  LPA++PDA+ P  GA I
Sbjct: 87  WANSGGLPALLPDAVLPLSGAAI 109


>UniRef50_A4XRA4 Cluster: Drug resistance transporter, Bcr/CflA
           subfamily precursor; n=1; Pseudomonas mendocina ymp|Rep:
           Drug resistance transporter, Bcr/CflA subfamily
           precursor - Pseudomonas mendocina ymp
          Length = 399

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   LRIMGFFTALIVN-IVGGAVLCMGGFLIPIVAPLL 103
           L ++G FTA++++ ++GG +   GG+  P+VA L+
Sbjct: 133 LTVLGMFTAIVLSPLLGGLLTQYGGWRAPLVASLV 167


>UniRef50_A3LST1 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 520

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 274 QNVLTSSSYLFLTNLWSWCYHGGGSQL*YNASG 176
           ++ + S+    +T+LWSWCY    S   YN  G
Sbjct: 111 ESQVASAPQFIVTSLWSWCYGNYDSTQYYNKYG 143


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,833,124
Number of Sequences: 1657284
Number of extensions: 6552823
Number of successful extensions: 17044
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17040
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)