Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_I03
         (408 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    74   6e-14
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    74   6e-14
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    74   6e-14
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    65   3e-11
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    65   3e-11

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 74.1 bits (174), Expect = 6e-14
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = +1

Query: 22  AAQXATDPIQQLFLXKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMT 201
           A   A+DPIQQLFL K+REYKQKSAGGK+ D++P +             Q+G     DM 
Sbjct: 27  ALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDML 86

Query: 202 AFPSLKFEEPKLDPIDE 252
            FP  +F + K+DPI +
Sbjct: 87  KFPEFQFPDVKVDPITQ 103


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 74.1 bits (174), Expect = 6e-14
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = +1

Query: 22  AAQXATDPIQQLFLXKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMT 201
           A   A+DPIQQLFL K+REYKQKSAGGK+ D++P +             Q+G     DM 
Sbjct: 27  ALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDML 86

Query: 202 AFPSLKFEEPKLDPIDE 252
            FP  +F + K+DPI +
Sbjct: 87  KFPEFQFPDVKVDPITQ 103


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 74.1 bits (174), Expect = 6e-14
 Identities = 35/77 (45%), Positives = 46/77 (59%)
 Frame = +1

Query: 22  AAQXATDPIQQLFLXKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMT 201
           A   A+DPIQQLFL K+REYKQKSAGGK+ D++P +             Q+G     DM 
Sbjct: 27  ALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDML 86

Query: 202 AFPSLKFEEPKLDPIDE 252
            FP  +F + K+DPI +
Sbjct: 87  KFPEFQFPDVKVDPITQ 103


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = +1

Query: 10  VNLAAAQXATDPIQQLFLXKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPG 189
           V+  A+    DPI Q+FL K+REY+ KS  GK  D  P               QYGGG G
Sbjct: 28  VSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEG 87

Query: 190 IDMTAFPSLKFEEPKLDPIDEQAAPK 267
           +DM  FP  K  +  +DPI     P+
Sbjct: 88  VDMLEFPKFKLPDIDIDPISVDDLPE 113


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = +1

Query: 10  VNLAAAQXATDPIQQLFLXKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPG 189
           V+  A+    DPI Q+FL K+REY+ KS  GK  D  P               QYGGG G
Sbjct: 16  VSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEG 75

Query: 190 IDMTAFPSLKFEEPKLDPIDEQAAPK 267
           +DM  FP  K  +  +DPI     P+
Sbjct: 76  VDMLEFPKFKLPDIDIDPISVDDLPE 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,163
Number of Sequences: 53049
Number of extensions: 250443
Number of successful extensions: 413
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)