Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H21
(777 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y1A3 Cluster: Mitochondrial import inner membrane tra... 94 4e-18
UniRef50_Q9Y5J9 Cluster: Mitochondrial import inner membrane tra... 91 4e-17
UniRef50_O60220 Cluster: Mitochondrial import inner membrane tra... 73 8e-12
UniRef50_Q5BSG5 Cluster: SJCHGC04400 protein; n=1; Schistosoma j... 64 5e-09
UniRef50_Q09783 Cluster: Mitochondrial import inner membrane tra... 59 1e-07
UniRef50_Q5BSR9 Cluster: SJCHGC03453 protein; n=1; Schistosoma j... 57 6e-07
UniRef50_A7PHM1 Cluster: Chromosome chr17 scaffold_16, whole gen... 56 1e-06
UniRef50_Q4PGP6 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_Q9XGY4 Cluster: Mitochondrial import inner membrane tra... 53 9e-06
UniRef50_A7E402 Cluster: Predicted protein; n=1; Sclerotinia scl... 50 5e-05
UniRef50_Q9N408 Cluster: Mitochondrial import inner membrane tra... 50 6e-05
UniRef50_Q0E8V7 Cluster: CG34132-PA; n=4; Eumetazoa|Rep: CG34132... 50 9e-05
UniRef50_P57744 Cluster: Mitochondrial import inner membrane tra... 49 1e-04
UniRef50_A4RRX5 Cluster: MPT family transporter: inner membrane ... 48 3e-04
UniRef50_Q4IJW4 Cluster: Mitochondrial import inner membrane tra... 48 3e-04
UniRef50_Q10481 Cluster: Mitochondrial import inner membrane tra... 46 8e-04
UniRef50_Q9XH48 Cluster: Mitochondrial import inner membrane tra... 46 0.001
UniRef50_Q8ILN5 Cluster: Putative uncharacterized protein; n=5; ... 45 0.002
UniRef50_Q7QKD6 Cluster: ENSANGP00000021883; n=4; Endopterygota|... 44 0.003
UniRef50_Q9Y8C0 Cluster: Mitochondrial import inner membrane tra... 44 0.003
UniRef50_Q4PGT2 Cluster: Mitochondrial import inner membrane tra... 44 0.004
UniRef50_Q4I6B0 Cluster: Mitochondrial import inner membrane tra... 44 0.006
UniRef50_Q1RL94 Cluster: Zinc finger protein; n=1; Ciona intesti... 43 0.007
UniRef50_Q1DWC9 Cluster: Predicted protein; n=2; Onygenales|Rep:... 43 0.007
UniRef50_A5DMT6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.010
UniRef50_Q59MI8 Cluster: Mitochondrial import inner membrane tra... 42 0.013
UniRef50_Q9Y5L4 Cluster: Mitochondrial import inner membrane tra... 42 0.017
UniRef50_A4S1U3 Cluster: MPT family transporter: inner membrane ... 41 0.030
UniRef50_A7AM86 Cluster: Tim10/DDP family zinc finger containing... 41 0.030
UniRef50_Q9XGY5 Cluster: Mitochondrial import inner membrane tra... 41 0.030
UniRef50_Q8I500 Cluster: Mitochondrial import inner membrane tra... 40 0.052
UniRef50_Q5KFM0 Cluster: Mitochondrial import inner membrane tra... 40 0.052
UniRef50_A5AF58 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_A7ARS5 Cluster: Mitochondrial transport complex Tim10, ... 40 0.069
UniRef50_Q9XGY2 Cluster: Small zinc finger-like protein; n=1; Br... 40 0.092
UniRef50_Q7SBR3 Cluster: Mitochondrial import inner membrane tra... 40 0.092
UniRef50_Q4X0V2 Cluster: Mitochondrial import inner membrane tra... 40 0.092
UniRef50_O45319 Cluster: Mitochondrial import inner membrane tra... 38 0.21
UniRef50_A4R8U7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q20CA7 Cluster: Dvir_CG11611; n=2; Drosophila|Rep: Dvir... 38 0.37
UniRef50_Q0UGV1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_A2QCP2 Cluster: Remark: alternate name in Schizosacchar... 37 0.65
UniRef50_Q4N7M1 Cluster: Mitochondrial import inner membrane tra... 36 1.5
UniRef50_A7AS04 Cluster: Mitochondrial import inner membrane tra... 36 1.5
UniRef50_Q5KDU4 Cluster: Mitochondrial import inner membrane tra... 36 1.5
UniRef50_Q237C8 Cluster: Tim10/DDP family zinc finger containing... 35 2.0
UniRef50_A7TND5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A2AX41 Cluster: Translocator of the inner mitochondrial... 34 3.4
UniRef50_A7AXE1 Cluster: Rps2; n=1; Babesia bovis|Rep: Rps2 - Ba... 34 3.4
UniRef50_Q5ZTV0 Cluster: Major facilitator family transporter; n... 33 6.0
UniRef50_Q4Y1F0 Cluster: Mitochondrial import inner membrane tra... 33 6.0
UniRef50_Q17754 Cluster: Mitochondrial import inner membrane tra... 33 6.0
UniRef50_Q4WIQ2 Cluster: Mitochondrial import inner membrane tra... 33 6.0
UniRef50_UPI0001509C5C Cluster: hypothetical protein TTHERM_0032... 33 8.0
UniRef50_Q9TXP1 Cluster: Putative uncharacterized protein; n=2; ... 33 8.0
UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4... 33 8.0
UniRef50_Q9XGX9 Cluster: Mitochondrial import inner membrane tra... 33 8.0
>UniRef50_Q9Y1A3 Cluster: Mitochondrial import inner membrane
translocase subunit Tim8; n=7; Eumetazoa|Rep:
Mitochondrial import inner membrane translocase subunit
Tim8 - Drosophila melanogaster (Fruit fly)
Length = 88
Score = 93.9 bits (223), Expect = 4e-18
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGGG 349
H FN CW+KCI KP KLD TETC++NCV+RFIDTSLLIT RFAQML+K GG
Sbjct: 32 HEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSLLITQRFAQMLQKRGG 85
>UniRef50_Q9Y5J9 Cluster: Mitochondrial import inner membrane
translocase subunit Tim8 B; n=19; Coelomata|Rep:
Mitochondrial import inner membrane translocase subunit
Tim8 B - Homo sapiens (Human)
Length = 83
Score = 90.6 bits (215), Expect = 4e-17
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGG 346
H F CWDKC+EKPG +LDSRTE C+++CV+RFIDT+L IT+RFAQ+++KGG
Sbjct: 30 HHFMELCWDKCVEKPGNRLDSRTENCLSSCVDRFIDTTLAITSRFAQIVQKGG 82
>UniRef50_O60220 Cluster: Mitochondrial import inner membrane
translocase subunit Tim8 A; n=20; Deuterostomia|Rep:
Mitochondrial import inner membrane translocase subunit
Tim8 A - Homo sapiens (Human)
Length = 97
Score = 72.9 bits (171), Expect = 8e-12
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQ 328
H CW+KC++KPG KLDSR E C NCVERFIDTS I NR Q
Sbjct: 37 HQMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQFILNRLEQ 83
>UniRef50_Q5BSG5 Cluster: SJCHGC04400 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04400 protein - Schistosoma
japonicum (Blood fluke)
Length = 82
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNR 319
H S CWD+C+ K LDSRTE+CI NCVER+ID S ++T R
Sbjct: 24 HQLTSICWDRCVTKLNNSLDSRTESCIANCVERYIDVSGVLTRR 67
>UniRef50_Q09783 Cluster: Mitochondrial import inner membrane
translocase subunit tim8; n=1; Schizosaccharomyces
pombe|Rep: Mitochondrial import inner membrane
translocase subunit tim8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 98
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGG 346
H F S CW KCI G KLD E C+ NCVERF+D + I R+A LEK G
Sbjct: 38 HQFTSTCWPKCIGNIGNKLDKSEEQCLQNCVERFLDCNFHIIKRYA--LEKFG 88
>UniRef50_Q5BSR9 Cluster: SJCHGC03453 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03453 protein - Schistosoma
japonicum (Blood fluke)
Length = 93
Score = 56.8 bits (131), Expect = 6e-07
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +2
Query: 200 SFCWDKCIEK-PGAKLDSRTETCITNCVERFIDTSLLITNRFAQML 334
S CWDKC P +KLD++ CI NC ER++D S+L+ +RF ML
Sbjct: 43 SVCWDKCATGYPSSKLDAKKANCIENCTERYLDVSMLLRSRFQSML 88
>UniRef50_A7PHM1 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=5; Magnoliophyta|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 77
Score = 56.0 bits (129), Expect = 1e-06
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 CWDKCIEK-PGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
CWDKCI PG+K S TC++NC +R++D SL+I RF M
Sbjct: 34 CWDKCITSTPGSKFSSSESTCLSNCAQRYMDMSLIIMKRFQSM 76
>UniRef50_Q4PGP6 Cluster: Putative uncharacterized protein; n=2;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 188
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKP-GAKLDSRTETCITNCVERFIDTSLLITNRFAQ 328
H F CWD+CI+ G+ E C++NCVERF+DTSL I N+ +
Sbjct: 95 HTFTDRCWDQCIKSSIGSSFGRGEEACLSNCVERFLDTSLFIVNKLQE 142
>UniRef50_Q9XGY4 Cluster: Mitochondrial import inner membrane
translocase subunit Tim8; n=4; Magnoliophyta|Rep:
Mitochondrial import inner membrane translocase subunit
Tim8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 52.8 bits (121), Expect = 9e-06
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 200 SFCWDKCIEK-PGAKLDSRTETCITNCVERFIDTSLLITNRF 322
S CWDKCI PG+K S +C+T+C +R++D S++I RF
Sbjct: 33 SVCWDKCITSAPGSKFSSSESSCLTHCAQRYMDMSMIIMKRF 74
>UniRef50_A7E402 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 97
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKP--GAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGG 346
H CW KC+ KLD ETC NCV+RF+D+S+ + M GG
Sbjct: 42 HSLTDVCWKKCVTGSIRSGKLDKSEETCTMNCVDRFLDSSMAVITHLNTMRANGG 96
>UniRef50_Q9N408 Cluster: Mitochondrial import inner membrane
translocase subunit tim-8; n=2; Caenorhabditis|Rep:
Mitochondrial import inner membrane translocase subunit
tim-8 - Caenorhabditis elegans
Length = 83
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 188 HXFNSFCWDKCIE--KPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
H CWD C +P +K+D +T+TCI NCV R ID S + ++M
Sbjct: 29 HTLTGRCWDVCFADYRPPSKMDGKTQTCIQNCVNRMIDASNFMVEHLSKM 78
>UniRef50_Q0E8V7 Cluster: CG34132-PA; n=4; Eumetazoa|Rep: CG34132-PA
- Drosophila melanogaster (Fruit fly)
Length = 84
Score = 49.6 bits (113), Expect = 9e-05
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C+ KC+ KPG LDS + CI+ C++RF+D+ LI+ + Q +++
Sbjct: 35 CFKKCVNKPGTSLDSSEQKCISMCMDRFMDSWNLISRVYGQRIQR 79
>UniRef50_P57744 Cluster: Mitochondrial import inner membrane
translocase subunit TIM8; n=4; Saccharomycetales|Rep:
Mitochondrial import inner membrane translocase subunit
TIM8 - Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPG-AKLDSRTETCITNCVERFIDTSLLITN 316
H F + C+ KC+E + L S+ E C++NCV RF+DT++ I N
Sbjct: 38 HQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIRIVN 81
>UniRef50_A4RRX5 Cluster: MPT family transporter: inner membrane
translocase (Import) Tim13; n=1; Ostreococcus
lucimarinus CCE9901|Rep: MPT family transporter: inner
membrane translocase (Import) Tim13 - Ostreococcus
lucimarinus CCE9901
Length = 81
Score = 48.0 bits (109), Expect = 3e-04
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGG 346
C+ KC+ KPG + S TC++ C +R+++ + +I++ Q KGG
Sbjct: 34 CFQKCVTKPGGSMSSGEATCLSRCTDRYVEATKMISHVVLQAYSKGG 80
>UniRef50_Q4IJW4 Cluster: Mitochondrial import inner membrane
translocase subunit TIM8; n=4; Pezizomycotina|Rep:
Mitochondrial import inner membrane translocase subunit
TIM8 - Gibberella zeae (Fusarium graminearum)
Length = 93
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGA----KLDSRTETCITNCVERFIDTSLL 307
H CW KC+ PG KLD ETC+ NCVERF+D + L
Sbjct: 42 HSLTQMCWSKCV--PGTIKNPKLDKSEETCLANCVERFLDVNYL 83
>UniRef50_Q10481 Cluster: Mitochondrial import inner membrane
translocase subunit tim13; n=1; Schizosaccharomyces
pombe|Rep: Mitochondrial import inner membrane
translocase subunit tim13 - Schizosaccharomyces pombe
(Fission yeast)
Length = 95
Score = 46.4 bits (105), Expect = 8e-04
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
N C+DKCI +PG+ D ++C++ C+ER++D +++ + +++
Sbjct: 42 NENCFDKCIPEPGSTFDPNEKSCVSKCMERYMDAWNIVSRTYISRMQR 89
>UniRef50_Q9XH48 Cluster: Mitochondrial import inner membrane
translocase subunit Tim13; n=2; Magnoliophyta|Rep:
Mitochondrial import inner membrane translocase subunit
Tim13 - Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 45.6 bits (103), Expect = 0.001
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLIT 313
C+DKC+ KPG+ L +CI+ CVER+++ + +I+
Sbjct: 45 CFDKCVTKPGSSLGGSESSCISRCVERYMEATAIIS 80
>UniRef50_Q8ILN5 Cluster: Putative uncharacterized protein; n=5;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 113
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNR 319
+S+C+DKC+ P L + + CI NC +R+I+ I NR
Sbjct: 34 SSYCFDKCVSYPEKSLSNTNKKCIWNCTQRYIECEYFIKNR 74
>UniRef50_Q7QKD6 Cluster: ENSANGP00000021883; n=4;
Endopterygota|Rep: ENSANGP00000021883 - Anopheles
gambiae str. PEST
Length = 89
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C+ KC+ KPG LD + CI C++RF+D+ +++ Q L++
Sbjct: 40 CFKKCVGKPGQDLDGSEQKCIAMCMDRFMDSWNVVSRALTQRLQQ 84
>UniRef50_Q9Y8C0 Cluster: Mitochondrial import inner membrane
translocase subunit tim-8; n=8; Pezizomycotina|Rep:
Mitochondrial import inner membrane translocase subunit
tim-8 - Neurospora crassa
Length = 92
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKP--GAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGG 346
H CW KC+ P +LD C+ +CVERF+D +L I Q + +GG
Sbjct: 37 HALTDSCWKKCVTSPIKTNQLDKTEAVCMADCVERFLDVNLTIM-AHVQKITRGG 90
>UniRef50_Q4PGT2 Cluster: Mitochondrial import inner membrane
translocase subunit TIM13; n=1; Ustilago maydis|Rep:
Mitochondrial import inner membrane translocase subunit
TIM13 - Ustilago maydis (Smut fungus)
Length = 108
Score = 44.0 bits (99), Expect = 0.004
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITN 316
C+ KCI PGA L + +TC+T C+ER+ + ++++
Sbjct: 49 CYSKCIPAPGASLSGKEQTCLTRCMERYFEAFNIVSS 85
>UniRef50_Q4I6B0 Cluster: Mitochondrial import inner membrane
translocase subunit TIM13; n=2; Pezizomycotina|Rep:
Mitochondrial import inner membrane translocase subunit
TIM13 - Gibberella zeae (Fusarium graminearum)
Length = 82
Score = 43.6 bits (98), Expect = 0.006
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGGG 349
C++KC+ KPG L S TC+T+C+E+++ ++ + + L + G
Sbjct: 34 CFEKCVPKPGTSLSSGETTCMTSCMEKYMAAWNMVNSAYIARLRQESG 81
>UniRef50_Q1RL94 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 103
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFID----TSLLITNRFAQMLE 337
N C+ CI PG+ LD + C++ CV+R+ID S +TN+ Q +
Sbjct: 51 NDKCFKMCINNPGSSLDGSQQKCLSKCVDRYIDAWNCVSRTVTNKIRQQAQ 101
>UniRef50_Q1DWC9 Cluster: Predicted protein; n=2; Onygenales|Rep:
Predicted protein - Coccidioides immitis
Length = 125
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +2
Query: 197 NSFCWDKCIEKP-GAKLDSRTETCITNCVERFID----TSLLITNRFAQMLEKGG 346
NS C++KCI P G+ S+ +TC+T C+E++I TS +R ++ EK G
Sbjct: 53 NSNCFEKCISSPPGSTFSSKDQTCLTACMEKYISLWNATSRAYVSRLSREQEKSG 107
>UniRef50_A5DMT6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 95
Score = 42.7 bits (96), Expect = 0.010
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLE 337
C+DKCI +PGA L + E C+T C+E+++ + +I+ + ++
Sbjct: 49 CFDKCIGQPGASLSNNDEGCLTQCMEKYMRSWNVISKTYIARIQ 92
>UniRef50_Q59MI8 Cluster: Mitochondrial import inner membrane
translocase subunit TIM8; n=7; Saccharomycetales|Rep:
Mitochondrial import inner membrane translocase subunit
TIM8 - Candida albicans (Yeast)
Length = 88
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 188 HXFNSFCWDKCI-EKP--GAKLDSRTETCITNCVERFIDTSLLI 310
H F C+ KC +KP A LD + E C+ NC+ RF+DT++ +
Sbjct: 38 HNFTDMCFKKCNKDKPITSATLDGQEEACLKNCLNRFLDTNIKV 81
>UniRef50_Q9Y5L4 Cluster: Mitochondrial import inner membrane
translocase subunit Tim13; n=16; Coelomata|Rep:
Mitochondrial import inner membrane translocase subunit
Tim13 - Homo sapiens (Human)
Length = 95
Score = 41.9 bits (94), Expect = 0.017
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C+ KCI KPG LD+ + CI C++R++D ++ + L++
Sbjct: 46 CFRKCIGKPGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQR 90
>UniRef50_A4S1U3 Cluster: MPT family transporter: inner membrane
translocase (Import) Tim8; n=1; Ostreococcus lucimarinus
CCE9901|Rep: MPT family transporter: inner membrane
translocase (Import) Tim8 - Ostreococcus lucimarinus
CCE9901
Length = 77
Score = 41.1 bits (92), Expect = 0.030
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 CWDKCIE-KPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
C++KC+ PGAK S +C+TNC R++++ ++ R M
Sbjct: 32 CFEKCVTYAPGAKFSSSESSCLTNCALRYLESGQVVLGRLQNM 74
>UniRef50_A7AM86 Cluster: Tim10/DDP family zinc finger containing
protein; n=3; Piroplasmida|Rep: Tim10/DDP family zinc
finger containing protein - Babesia bovis
Length = 90
Score = 41.1 bits (92), Expect = 0.030
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
C+++C+ PG L S +TC+ C +R I+T I R M
Sbjct: 40 CFERCVSSPGESLTSAQQTCLWRCAQRNIETQYFIIKRLEGM 81
>UniRef50_Q9XGY5 Cluster: Mitochondrial import inner membrane
translocase subunit Tim13; n=5; Oryza sativa|Rep:
Mitochondrial import inner membrane translocase subunit
Tim13 - Oryza sativa subsp. japonica (Rice)
Length = 84
Score = 41.1 bits (92), Expect = 0.030
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLIT 313
C+ KC+ KPG+ L +CI+ CV+R+I+ + +++
Sbjct: 41 CFAKCVTKPGSSLSGSESSCISRCVDRYIEATGIVS 76
>UniRef50_Q8I500 Cluster: Mitochondrial import inner membrane
translocase subunit, putative; n=4; Plasmodium|Rep:
Mitochondrial import inner membrane translocase subunit,
putative - Plasmodium falciparum (isolate 3D7)
Length = 103
Score = 40.3 bits (90), Expect = 0.052
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
C++KC+ K G KL S + CI +C + T++ + R QM
Sbjct: 49 CFNKCVSKIGPKLSSSEQKCIWDCANSYFYTNVFLNQRLEQM 90
>UniRef50_Q5KFM0 Cluster: Mitochondrial import inner membrane
translocase subunit TIM8; n=2; Filobasidiella
neoformans|Rep: Mitochondrial import inner membrane
translocase subunit TIM8 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 88
Score = 40.3 bits (90), Expect = 0.052
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 188 HXFNSFCWDKCIEKPGAKLDSRTET-CITNCVERFIDTSLLITNR 319
H + CW+ CI + S++E C+ NCV+RF+D+SL I +
Sbjct: 36 HELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLYIVRQ 80
>UniRef50_A5AF58 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 117
Score = 39.9 bits (89), Expect = 0.069
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 CWDKCIEK-PGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
C+ C++ P LD + ETC+ C E+F+ S+ + RFA++
Sbjct: 67 CFTDCVDSFPRKSLDKQEETCVRRCAEKFLKHSMRVGMRFAEL 109
>UniRef50_A7ARS5 Cluster: Mitochondrial transport complex Tim10,
putative; n=1; Babesia bovis|Rep: Mitochondrial
transport complex Tim10, putative - Babesia bovis
Length = 77
Score = 39.9 bits (89), Expect = 0.069
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 206 CWDKCIEK-PGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKG 343
CW KCI +++D+ ++C+ CV +F+D ++ NR + + G
Sbjct: 29 CWTKCIAGVKDSRMDAGEQSCVDRCVNKFLDVHQMVGNRLQEASKNG 75
>UniRef50_Q9XGY2 Cluster: Small zinc finger-like protein; n=1;
Brassica rapa|Rep: Small zinc finger-like protein -
Brassica campestris (Field mustard)
Length = 57
Score = 39.5 bits (88), Expect = 0.092
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 200 SFCWDKCIEKPGAKLDSRTETCITN 274
S CWDKC+ KPG+K S +C++N
Sbjct: 33 SSCWDKCVXKPGSKFSSSETSCLSN 57
>UniRef50_Q7SBR3 Cluster: Mitochondrial import inner membrane
translocase subunit tim-13; n=2; Sordariales|Rep:
Mitochondrial import inner membrane translocase subunit
tim-13 - Neurospora crassa
Length = 86
Score = 39.5 bits (88), Expect = 0.092
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGGG 349
C+ C+ KPG+ L + +TC+T C E+++ ++ + + +++ G
Sbjct: 37 CFTSCVPKPGSSLSNSEKTCVTQCTEKYMAAWNVVNTTYLRRIQQEMG 84
>UniRef50_Q4X0V2 Cluster: Mitochondrial import inner membrane
translocase subunit tim13; n=7; Pezizomycotina|Rep:
Mitochondrial import inner membrane translocase subunit
tim13 - Aspergillus fumigatus (Sartorya fumigata)
Length = 113
Score = 39.5 bits (88), Expect = 0.092
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFI 292
N C++ CI PG L S TC++ C+E++I
Sbjct: 44 NEHCFEACIPNPGTSLSSAEHTCLSQCMEKYI 75
>UniRef50_O45319 Cluster: Mitochondrial import inner membrane
translocase subunit tim-13; n=3; Chromadorea|Rep:
Mitochondrial import inner membrane translocase subunit
tim-13 - Caenorhabditis elegans
Length = 108
Score = 38.3 bits (85), Expect = 0.21
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C +KCI PG+ L S + C+ C++RF+++ L++ + L++
Sbjct: 45 CTNKCITAPGSSLASGEKQCLQRCMDRFMESWNLVSQTLQKRLQE 89
>UniRef50_A4R8U7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 120
Score = 37.9 bits (84), Expect = 0.28
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
NS C++KC+ PG+ L C+ C E++I ++ + + +++
Sbjct: 67 NSTCFEKCVPTPGSSLSGSETACVQACTEKYIQAWNVVNASYLRRIQQ 114
>UniRef50_Q20CA7 Cluster: Dvir_CG11611; n=2; Drosophila|Rep:
Dvir_CG11611 - Drosophila virilis (Fruit fly)
Length = 87
Score = 37.5 bits (83), Expect = 0.37
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C++KC+ KP L ++CI C++R++D+ L + + L +
Sbjct: 36 CFEKCVTKPRDHLSGPEQSCIHLCMDRYLDSFRLCAHTYGHRLRR 80
>UniRef50_Q0UGV1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 94
Score = 37.5 bits (83), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 188 HXFNSFCWDKCIEK---PGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 331
H C+ KCI KLD E C+ CV+RF+D +L++ ++
Sbjct: 42 HSLTDTCFRKCIPAGNVKNGKLDKYEEPCMRQCVDRFLDANLVVLRELERL 92
>UniRef50_A2QCP2 Cluster: Remark: alternate name in
Schizosaccharomyces pombe = SPAC17C9. 09c; n=1;
Aspergillus niger|Rep: Remark: alternate name in
Schizosaccharomyces pombe = SPAC17C9. 09c - Aspergillus
niger
Length = 99
Score = 36.7 bits (81), Expect = 0.65
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFI 292
N C++ C+ PG + + + C+T+C+E++I
Sbjct: 44 NEHCFEACVPTPGTTMSAGEQACLTDCMEKYI 75
>UniRef50_Q4N7M1 Cluster: Mitochondrial import inner membrane
translocase, putative; n=2; Theileria|Rep: Mitochondrial
import inner membrane translocase, putative - Theileria
parva
Length = 91
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQMLEK 340
C+++C+ +K LD + C+ +CV+ F D S ++ RFA+ K
Sbjct: 45 CFNECVSGFRSKDLDKKESQCVESCVKLFFDFSQRVSTRFAEKQSK 90
>UniRef50_A7AS04 Cluster: Mitochondrial import inner membrane
translocase subunit, putative; n=1; Babesia bovis|Rep:
Mitochondrial import inner membrane translocase subunit,
putative - Babesia bovis
Length = 92
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 328
C+++CI +K LD R C+ +CV+ F + S I RFA+
Sbjct: 45 CFNECISSFRSKELDKRENACVESCVKMFFEFSQRIGQRFAE 86
>UniRef50_Q5KDU4 Cluster: Mitochondrial import inner membrane
translocase subunit TIM13; n=2; Filobasidiella
neoformans|Rep: Mitochondrial import inner membrane
translocase subunit TIM13 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 99
Score = 35.5 bits (78), Expect = 1.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGGGM 352
N C+ KC+ KP L S E+C++ C+ ++ ++ + + K G+
Sbjct: 44 NENCFAKCVTKPSTSLSSSQESCLSQCMTLYMAAFDQVSRSYVARISKERGV 95
>UniRef50_Q237C8 Cluster: Tim10/DDP family zinc finger containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Tim10/DDP family zinc finger containing protein -
Tetrahymena thermophila SB210
Length = 76
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 197 NSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQMLEKGGGM 352
++ C+DKC+ P KL++ E C+ +C + I+ F L + GG+
Sbjct: 20 DTICYDKCVSTPQKKLNNNEEYCLKSCTIKLINAL-----NFMHTLNENGGV 66
>UniRef50_A7TND5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 596
Score = 34.7 bits (76), Expect = 2.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 559 CALQTTITCSNSDFLSLNMQNNYYYTTTVKQSIVNSNLLIYFYTNINL 416
C + I+ N + + NY TT V S +++ LL Y YTN N+
Sbjct: 24 CISTSQISLKNKGYKNYQYGKNYKTTTIVASSALSTTLLAYLYTNNNI 71
>UniRef50_A2AX41 Cluster: Translocator of the inner mitochondrial
membrane 9; n=1; Guillardia theta|Rep: Translocator of
the inner mitochondrial membrane 9 - Guillardia theta
(Cryptomonas phi)
Length = 99
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQM-LEKGGGM 352
C++ C+ +K LD R E CIT C +FI S F + ++ G GM
Sbjct: 41 CFNNCVTSFRSKTLDDREEKCITRCTTKFIKASARAGQAFQAIGMQPGQGM 91
>UniRef50_A7AXE1 Cluster: Rps2; n=1; Babesia bovis|Rep: Rps2 -
Babesia bovis
Length = 221
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = -3
Query: 685 IRFKLELKGFFHINFVLELSKYNTY*REIDNYVRLAQICIIACALQTTITCSNSDFLSLN 506
+ F + LK + HI+ + +L+K + +N ++ C I L T ++ +
Sbjct: 3 LNFNILLKNYLHISNIRKLTK------KTNNLYKIIDNCYIINILHTAVSLYKLYKIIFL 56
Query: 505 MQNNYYYTTTVKQSIVNSNLLIYFYT 428
+ N Y T + + +N+N IY+ T
Sbjct: 57 LSKNKSYITLINTTKLNTNKFIYYLT 82
>UniRef50_Q5ZTV0 Cluster: Major facilitator family transporter; n=1;
Legionella pneumophila subsp. pneumophila str.
Philadelphia 1|Rep: Major facilitator family transporter
- Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 401
Score = 33.5 bits (73), Expect = 6.0
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = -3
Query: 700 ICSEPIRFKLELKGFFHINFVLELSKYNTY*REIDNYVRLAQICIIACALQTTITCSNSD 521
IC + K + KG +F+L + + ++ + + ++ + ITCSNS
Sbjct: 72 ICGGYVTGKAQAKGIIGASFLLMGVAFVILAKVSSFHLSVVFVLLMGFGINLFITCSNSS 131
Query: 520 FLSLNMQNNYYYTTTVKQSIVNS 452
FL ++ N ++ T+ QS N+
Sbjct: 132 FLQISKNTN--HSLTIAQSYKNA 152
>UniRef50_Q4Y1F0 Cluster: Mitochondrial import inner membrane
translocase subunit, putative; n=1; Plasmodium
chabaudi|Rep: Mitochondrial import inner membrane
translocase subunit, putative - Plasmodium chabaudi
Length = 87
Score = 33.5 bits (73), Expect = 6.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 206 CWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLI 310
C++KC+ K G KL S + CI +C + T+ +
Sbjct: 51 CFNKCVPKIGNKLSSNEQKCIWDCANSYFYTNAFL 85
>UniRef50_Q17754 Cluster: Mitochondrial import inner membrane
translocase subunit Tim9; n=3; Caenorhabditis|Rep:
Mitochondrial import inner membrane translocase subunit
Tim9 - Caenorhabditis elegans
Length = 90
Score = 33.5 bits (73), Expect = 6.0
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 328
C++ C+ + G++ + + E+C NC+++F+ + ++ RF +
Sbjct: 24 CFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQE 65
>UniRef50_Q4WIQ2 Cluster: Mitochondrial import inner membrane
translocase subunit tim9; n=9; Pezizomycotina|Rep:
Mitochondrial import inner membrane translocase subunit
tim9 - Aspergillus fumigatus (Sartorya fumigata)
Length = 90
Score = 33.5 bits (73), Expect = 6.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 328
C+D C+ K L SR E CI CV++++ S + RF +
Sbjct: 35 CFDNCVNDFTTKSLISREEGCIMRCVDKYMKASSRLNERFQE 76
>UniRef50_UPI0001509C5C Cluster: hypothetical protein TTHERM_00326910;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00326910 - Tetrahymena thermophila SB210
Length = 1657
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 556 ALQTTITCSNSDFLSLNMQNNYYYTT 479
AL+TT FLSLN+Q N YYTT
Sbjct: 1448 ALETTTKLGAQTFLSLNIQQNNYYTT 1473
>UniRef50_Q9TXP1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 475
Score = 33.1 bits (72), Expect = 8.0
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = -3
Query: 550 QTTITCSNSDFLSLNMQNNYYYTTTVKQSIVNSNLLIYFYTNINLKFSLYYFMN*N*KFQ 371
Q I C S ++S Q N Y TTT SI +L ++ +T FS+ YF+ + KF
Sbjct: 165 QKFIFCFLSVYISRIFQENLYSTTTTYTSISLFSLSLFPFT---FPFSIPYFLF-SYKFP 220
Query: 370 IFYTSMHSAP 341
F ++H+ P
Sbjct: 221 SFCRNIHTIP 230
>UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4
protein - Plasmodium falciparum
Length = 208
Score = 33.1 bits (72), Expect = 8.0
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = -3
Query: 679 FKLELKGFFHI--NFVLELSKYNTY*REIDNY-VRLAQICIIACA-LQTTITCSNSDFLS 512
F L+LK +I N+ + KY Y +IDN + + ++ L+ I N F
Sbjct: 42 FDLKLKFIRYICYNYCITYKKYLYYLNKIDNKNINILYFKLLKILELRLDIFLVNIGFFK 101
Query: 511 LNMQNNYYYTTTVKQSIVNSNLLIYFYTNINLKFSLYYFMN*N*KFQI 368
+Q+ YY +K + N +I Y NINLK + F N K+ I
Sbjct: 102 TILQSRYY----IKYKNIYINNIINKYYNINLKNNDILFFNNKIKYII 145
>UniRef50_Q9XGX9 Cluster: Mitochondrial import inner membrane
translocase subunit Tim9; n=6; Viridiplantae|Rep:
Mitochondrial import inner membrane translocase subunit
Tim9 - Arabidopsis thaliana (Mouse-ear cress)
Length = 93
Score = 33.1 bits (72), Expect = 8.0
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQM 331
C+ C++ K L + ETC+ C E+F+ ++ + RFA++
Sbjct: 43 CFVDCVDSFTRKSLQKQEETCVMRCAEKFLKHTMRVGMRFAEL 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,424,014
Number of Sequences: 1657284
Number of extensions: 12478854
Number of successful extensions: 31004
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 29465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30969
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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