Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H20
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.56 
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    24   1.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    24   1.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    24   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.0  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 648 TTTEPGGIPSPPDVPILNTIGSTA 577
           T+T     P+PP VP+ + +  TA
Sbjct: 44  TSTTAAATPTPPSVPVGSAVAGTA 67


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 224 GIPFLGAMAPIR*HSWRNAAPKCCNEERKHNDTAFDELMSHEKNEIEAPT 75
           G+ F+ A      HS+  A  +   EERK+ DT    L S E++++ A T
Sbjct: 5   GVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVL-VLPSIERDQMMAAT 53


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 224 GIPFLGAMAPIR*HSWRNAAPKCCNEERKHNDTAFDELMSHEKNEIEAPT 75
           G+ F+ A      HS+  A  +   EERK+ DT    L S E++++ A T
Sbjct: 5   GVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVL-VLPSIERDQMMAAT 53


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 224 GIPFLGAMAPIR*HSWRNAAPKCCNEERKHNDTAFDELMSHEKNEIEAPT 75
           G+ F+ A      HS+  A  +   EERK+ DT    L S E++++ A T
Sbjct: 5   GVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVL-VLPSIERDQMMAAT 53


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 678  SKYPLRPQLDTTTEPGGIPSP 616
            +K  L+PQ   T+ PGGIP P
Sbjct: 1122 NKPQLKPQKPFTS-PGGIPGP 1141


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 619 PPRRANSEHYRVDSLGVMQQLN 554
           P + A+S  YR +S+G +   N
Sbjct: 692 PTKNADSREYRSNSMGAVMTRN 713


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 270 ISWNPMYCIIWAWIRKITI 326
           + W+  + +  AW RK+TI
Sbjct: 494 LQWSSTHTLDVAWRRKVTI 512


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 270 ISWNPMYCIIWAWIRKITI 326
           + W+  + +  AW RK+TI
Sbjct: 532 LQWSSTHTLDVAWRRKVTI 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,222
Number of Sequences: 438
Number of extensions: 5068
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)