Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H19
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.82 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   3.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   3.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   3.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   3.3  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   4.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.6  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 260 DRTDTRIESTRTPRAIARSHSPASTYQH 177
           + T  R ++  + RA+A+ HSPA    H
Sbjct: 102 EETVVRDKAVESLRAVAQQHSPADLENH 129


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 268 ETTLGHYTPTWAVHIPEGRE 327
           E  +GHY P +A H+ +  E
Sbjct: 215 EPFVGHYAPLYASHLDQTDE 234


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 268 ETTLGHYTPTWAVHIPEGRE 327
           E  +GHY P +A H+ +  E
Sbjct: 216 EPFVGHYAPLYASHLDQTDE 235


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 268 ETTLGHYTPTWAVHIPEGRE 327
           E  +GHY P +A H+ +  E
Sbjct: 216 EPFVGHYAPLYASHLDQTDE 235


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 293 QHGPSIYRKEEKLPMPSPGTTASSILER 376
           QH   ++ ++   P+PSP   A  +L R
Sbjct: 99  QHEKGMHDQQNNNPLPSPRRVAVPVLVR 126


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 456 SAVMLVGCREGSLR**TMMKMVVIVEYLSK 367
           S    VGC E  L    M K   ++EYLSK
Sbjct: 91  STKYFVGCVESLLLSEEMPKFRKMIEYLSK 120


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 680 SLRINFKSAERVXPLIRVFSXRFLSASRFDAAEEEGSDVL-VSAVEYNVDMI*KSLFFLD 504
           SLR ++KSA  V  L  +     +S  +      +G D+L  + + + +  +  SL FL+
Sbjct: 45  SLRFSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLFLN 104


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 680 SLRINFKSAERVXPLIRVFSXRFLSASRFDAAEEEGSDVL-VSAVEYNVDMI*KSLFFLD 504
           SLR ++KSA  V  L  +     +S  +      +G D+L  + + + +  +  SL FL+
Sbjct: 45  SLRFSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLFLN 104


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 147 FGPKKSDSIFKKK 109
           +GP+KS SI KKK
Sbjct: 203 YGPEKSASIPKKK 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,682
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)