BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H19
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone conv... 55 6e-08
Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protei... 46 3e-05
Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical pr... 44 8e-05
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 39 0.004
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 39 0.004
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 39 0.004
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 39 0.004
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 39 0.004
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 39 0.004
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 39 0.004
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 39 0.004
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 35 0.051
AF016449-5|AAG23995.1| 343|Caenorhabditis elegans Serpentine re... 30 1.9
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 4.4
>Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical
protein C51E3.7a protein.
Length = 652
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 286 YTPTWAVHIPEGREVADA--VARDHGFVNLGKIF--DDHYHFHHRSLTKRSLTAAHEHHG 453
YT + VH+ EG + DA +A+ HGF+N G++ D+ YHF +L + HH
Sbjct: 26 YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHFVQPALVHARTRRSAGHHA 85
Query: 454 RLEGDSRVRWAEQQKILSRKKRDFQ 528
+L D V EQ K +R KR ++
Sbjct: 86 KLHNDDEVLHVEQLKGYTRTKRGYR 110
>U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone
convertase 2 protein.
Length = 652
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 286 YTPTWAVHIPEGREVADA--VARDHGFVNLGKIF--DDHYHFHHRSLTKRSLTAAHEHHG 453
YT + VH+ EG + DA +A+ HGF+N G++ D+ YHF +L + HH
Sbjct: 26 YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHFVQPALVHARTRRSAGHHA 85
Query: 454 RLEGDSRVRWAEQQKILSRKKRDFQ 528
+L D V EQ K +R KR ++
Sbjct: 86 KLHNDDEVLHVEQLKGYTRTKRGYR 110
>Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical
protein F11A6.1b protein.
Length = 760
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 286 YTPTWAVHIPEGR-EVADAVARDHGFVNLGKIF--DDHYHFHH-RSLTKRSLTAAHEHHG 453
YT WAV I G+ E A+ +A +G+ NLG I D++Y F R ++ S
Sbjct: 58 YTNEWAVRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSAN 117
Query: 454 RLEGDSRVRWAEQQKILSRKKRDFQII 534
+L+ + V W EQQ R KR ++ I
Sbjct: 118 QLQHEEDVMWMEQQVAKRRVKRGYRRI 144
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 676 NDPKWPHMWYLNRG 717
NDP W MWYLNRG
Sbjct: 175 NDPLWTDMWYLNRG 188
>Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical
protein F11A6.1a protein.
Length = 692
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 286 YTPTWAVHIPEGR-EVADAVARDHGFVNLGKIF--DDHYHFHH-RSLTKRSLTAAHEHHG 453
YT WAV I G+ E A+ +A +G+ NLG I D++Y F R ++ S
Sbjct: 58 YTNEWAVRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSAN 117
Query: 454 RLEGDSRVRWAEQQKILSRKKRDFQII 534
+L+ + V W EQQ R KR ++ I
Sbjct: 118 QLQHEEDVMWMEQQVAKRRVKRGYRRI 144
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 676 NDPKWPHMWYLNRG 717
NDP W MWYLNRG
Sbjct: 175 NDPLWTDMWYLNRG 188
>U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protein
protein.
Length = 692
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 286 YTPTWAVHIPEGR-EVADAVARDHGFVNLGKIF--DDHYHFHH-RSLTKRSLTAAHEHHG 453
YT WAV I G+ E A+ +A +G+ NLG I D++Y F R ++ S
Sbjct: 58 YTNEWAVRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSAN 117
Query: 454 RLEGDSRVRWAEQQKILSRKKRDFQII 534
+L+ + V W EQQ R KR ++ I
Sbjct: 118 QLQHEEDVMWMEQQVAKRRVKRGYRRI 144
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 676 NDPKWPHMWYLNRG 717
NDP W MWYLNRG
Sbjct: 175 NDPLWTDMWYLNRG 188
>Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical
protein C51E3.7b protein.
Length = 556
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 286 YTPTWAVHIPEGREVADA--VARDHGFVNLGKI--FDDHYHFHHRSLTKRSLTAAHEHHG 453
YT + VH+ EG + DA +A+ HGF+N G++ D+ YHF +L + HH
Sbjct: 26 YTNHFHVHLKEGGGLEDAHRIAKRHGFINRGQVAASDNEYHFVQPALVHARTRRSAGHHA 85
Query: 454 RLEGD 468
+L D
Sbjct: 86 KLHND 90
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 325 EVADAVARDHGFVNLGKIFDDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
E+A +A DH G F D ++F + S T R+ RL+ V W E+Q+
Sbjct: 52 ELARRIAADHDMHVKGDPFLDTHYFLYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPK 111
Query: 505 SRKKRDFQII 534
R KRD+ ++
Sbjct: 112 KRVKRDYILL 121
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 382 DDHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKILSRKKR 519
+ H+H HH R L+++H + G S++R L+RKKR
Sbjct: 34 NSHHHHHHLPPAPRHLSSSHHQIETISGSSKLRAQSGSPALNRKKR 79
>AF016449-5|AAG23995.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein185 protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 19 HLXVVLCSSRHPSQSLXXNXSALNSYSRSVFFFKYTIRLFRT 144
H+ + C + S+SL +L +Y V FF Y++ F +
Sbjct: 34 HIIAIFCILKRSSESLESLKWSLLNYHSMVIFFSYSVNFFES 75
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 385 DHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
DH+ H R L + EHH R E +SR R A QQ +L
Sbjct: 706 DHHEEHRRRLEEHR-RREEEHHRRQEEESRAR-ALQQSLL 743
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 385 DHYHFHHRSLTKRSLTAAHEHHGRLEGDSRVRWAEQQKIL 504
DH+ H R L + EHH R E +SR R A QQ +L
Sbjct: 706 DHHEEHRRRLEEHR-RREEEHHRRQEEESRAR-ALQQSLL 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,469,694
Number of Sequences: 27780
Number of extensions: 346328
Number of successful extensions: 906
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -