Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H18
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IR11 Cluster: CG32571-PA; n=2; Sophophora|Rep: CG3257...    40   0.069
UniRef50_Q6GLY6 Cluster: MGC84114 protein; n=6; Xenopus|Rep: MGC...    36   1.5  
UniRef50_A4VYG7 Cluster: Predicted membrane protein; n=4; Bacter...    35   2.6  
UniRef50_Q26DB1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  
UniRef50_Q2Q573 Cluster: Mating-induced protein M96-1; n=18; Phy...    34   4.6  

>UniRef50_Q8IR11 Cluster: CG32571-PA; n=2; Sophophora|Rep:
           CG32571-PA - Drosophila melanogaster (Fruit fly)
          Length = 346

 Score = 39.9 bits (89), Expect = 0.069
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 590 PTYNYNQYKTSAASKYQEHYVQQQPTQVYKHFYVHAAXXXXXXXXXXXXXXXXXAQKHYK 769
           PT NYN+ ++     Y  H    QP Q+ KHFY+H+A                  QK+Y+
Sbjct: 125 PTINYNEQES-----YISHLANFQPAQINKHFYIHSAPEDHDEQQIVRYVNVGRPQKNYR 179

Query: 770 II 775
           ++
Sbjct: 180 VV 181


>UniRef50_Q6GLY6 Cluster: MGC84114 protein; n=6; Xenopus|Rep:
           MGC84114 protein - Xenopus laevis (African clawed frog)
          Length = 235

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 22/104 (21%), Positives = 38/104 (36%)
 Frame = +2

Query: 377 RNHASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYYPIXXXXXXXXXXXXXPIYS 556
           RN     GY +   N+  +G +    PY  + G+ FN   +                   
Sbjct: 50  RNPNYPGGYGWNTGNTGNTGGSWGQQPYNPSGGSNFNNKQWKPPKSKTNMKAVAVGAAAG 109

Query: 557 TIGADLSQSLIPTYNYNQYKTSAASKYQEHYVQQQPTQVYKHFY 688
            IG  +  + +   N++ +     S+Y   Y  Q P +VY+  Y
Sbjct: 110 AIGGYMLGNAVGRMNHH-FDNPMESRYYNDYYNQMPDRVYRPMY 152


>UniRef50_A4VYG7 Cluster: Predicted membrane protein; n=4;
           Bacteria|Rep: Predicted membrane protein - Streptococcus
           suis (strain 05ZYH33)
          Length = 233

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 769 FIVFLGRREYNRRAWXWYFGXFRSSVYIEVLVDLSWLLLYVVFLIFA-GSTCFVLIIIIG 593
           F  +L RR + ++ W W+FG   SSV + VL+ L+ +L  ++   F   S  FV  I + 
Sbjct: 81  FFTYLARRYFEKQTWSWHFG---SSVMMLVLILLTIILSPIMPASFTIASLAFVASIQVE 137

Query: 592 RNQALR 575
             + LR
Sbjct: 138 TFRRLR 143


>UniRef50_Q26DB1 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 250

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +3

Query: 453 THIILPLALVSTDCTIRFLPAVARTRKSQLARYILQSELTYRKA*FLPIIIINTKQVL-P 629
           T +I+ L L++T C     P V     +    +++Q + T  K   LP+ I +T+ +  P
Sbjct: 8   TLLIVTLTLITTSCDTERKPQVVIDENTVAEDFVIQEDTTMVKVLSLPVYIDSTQYIYHP 67

Query: 630 AN-IKNTTYNNNQLKXXXXXXXXXXXXNPKYQXH 728
              + N T N+++              N KY  +
Sbjct: 68  TKLLSNRTKNDSRRFSMSKNSYESGNSNSKYSHY 101


>UniRef50_Q2Q573 Cluster: Mating-induced protein M96-1; n=18;
           Phytophthora infestans|Rep: Mating-induced protein M96-1
           - Phytophthora infestans (Potato late blight fungus)
          Length = 311

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 374 YRNHASGSGYYFGDAN---SAGSGLTNNYYP-YYSTSGAGFNGLYYP 502
           Y+++      Y+G  N   ++G G   +YYP YYS+ G G    YYP
Sbjct: 157 YKSYGGDCDDYYGHGNDYYNSGKGYGGDYYPDYYSSYGVGNGYGYYP 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,970,834
Number of Sequences: 1657284
Number of extensions: 11626251
Number of successful extensions: 30024
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29991
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)