Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H18
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.89 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.89 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.89 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.89 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 596 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 682
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 119 SHLGYDYKVPQTSYGYPSYQLGESSSH 199
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 596 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 682
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 119 SHLGYDYKVPQTSYGYPSYQLGESSSH 199
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 596 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 682
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 119 SHLGYDYKVPQTSYGYPSYQLGESSSH 199
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 596 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 682
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 119 SHLGYDYKVPQTSYGYPSYQLGESSSH 199
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 658 LLYVVFLIFAGSTCFVLIIIIGRNQALR 575
           + Y+V L FA    F+LI +    + +R
Sbjct: 285 IAYIVLLTFASDLLFILIQLFNSLRRMR 312


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 614 KTSAASKYQEHYVQQQPTQVYKHFY 688
           KT    KY+  Y   Q  ++ K FY
Sbjct: 152 KTRTKDKYRVVYTDHQRVELEKEFY 176


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 74  LWILGFTLAVALADV 118
           LWIL FTL V ++ V
Sbjct: 36  LWILLFTLGVTISGV 50


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 380 FGSQSNQKWIPS 345
           F SQ+N  W+P+
Sbjct: 802 FSSQNNTNWVPT 813


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,060
Number of Sequences: 336
Number of extensions: 2926
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)