Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H18
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0239 - 16099673-16100251                                         29   3.1  
07_03_0563 - 19542116-19542217,19542631-19542712,19543823-195445...    29   3.1  
10_08_0240 - 16106963-16107538                                         29   4.1  
10_08_0238 - 16093780-16094355                                         29   5.4  
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183...    28   7.2  

>10_08_0239 - 16099673-16100251
          Length = 192

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 374 YRNHASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNG 490
           Y    SGSGY  G  +S  S   N YY Y  +S AG  G
Sbjct: 82  YGGSGSGSGYGTGSGSSQTS--QNRYYSYGGSSSAGGAG 118


>07_03_0563 -
           19542116-19542217,19542631-19542712,19543823-19544595,
           19545207-19545296,19545612-19545689,19546112-19546207,
           19546285-19546365,19546587-19546787,19546875-19546967,
           19547052-19547116,19547684-19547715,19548844-19548956
          Length = 601

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 377 RNHASGSGYYFGDANSAGSGLTNNYYPYYS--TSGAGFNGLYY 499
           RN   G+G + G+ N+ GSG +N+   + +   +G+ FN ++Y
Sbjct: 506 RNGGGGNGGHPGEQNNDGSGFSNSGISFTTPRLAGSHFNYIFY 548


>10_08_0240 - 16106963-16107538
          Length = 191

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 374 YRNHASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNG 490
           Y    SGSGY  G  +S  S   N YY Y  +S AG  G
Sbjct: 82  YGGSGSGSGYGSGSGSSQTS--QNGYYGYGGSSSAGGAG 118


>10_08_0238 - 16093780-16094355
          Length = 191

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +2

Query: 374 YRNHASGSGYYFGDANSAGSGLTNNYYPY---YSTSGAGFNG 490
           Y    SGSGY  G  +S  S   N YY Y    S SGAG  G
Sbjct: 82  YGGSGSGSGYGTGSGSSQTS--QNGYYGYGGSSSASGAGVGG 121


>03_05_0815 +
           27917516-27917767,27918024-27918110,27918281-27918394,
           27919644-27919835,27919925-27921677,27921771-27922708,
           27923587-27923859
          Length = 1202

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 706 FRSSVYIEVLVDLSWLLLYVVFLIFAGSTCF 614
           ++ S+Y+E+L  L++LLL    +IFA    F
Sbjct: 321 YKISLYVEILAILAFLLLLFTNIIFAAEILF 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,025,559
Number of Sequences: 37544
Number of extensions: 313306
Number of successful extensions: 747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)