Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H18
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z71185-6|CAI46563.1|  286|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z81030-3|CAB02707.1|  138|Caenorhabditis elegans Hypothetical
           protein C01G10.5 protein.
          Length = 138

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 401 YYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYY 499
           YY+ + N+ G    N Y  YY       NG YY
Sbjct: 24  YYYPNNNNNGYNYNNGYTTYYYYPNNNNNGYYY 56


>Z71185-6|CAI46563.1|  286|Caenorhabditis elegans Hypothetical
           protein C35A5.10 protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 24/96 (25%), Positives = 36/96 (37%)
 Frame = +2

Query: 374 YRNHASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYYPIXXXXXXXXXXXXXPIY 553
           Y  +  GS  Y   A+S  S   NNY PY + +   +NG Y P              P+ 
Sbjct: 99  YVAYNMGSNAYSPCASSCCSNNNNNYNPYINNN---YNGNYNPYGTSNGGYNAYGTIPVN 155

Query: 554 STIGADLSQSLIPTYNYNQYKTSAASKYQEHYVQQQ 661
             + +  + +     N NQY    A ++   Y   Q
Sbjct: 156 VNVPSSSTNT-----NVNQYLPYGAQQFTGTYQNGQ 186


>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical
           protein W07E11.1 protein.
          Length = 2207

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 708 NPKYQXHALLLYSRLPKNTIKSF 776
           NP+YQ H  L++SR   NT  S+
Sbjct: 254 NPEYQTHLALVHSRFSTNTFPSW 276


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical
           protein W07E11.1 protein.
          Length = 2207

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 708 NPKYQXHALLLYSRLPKNTIKSF 776
           NP+YQ H  L++SR   NT  S+
Sbjct: 254 NPEYQTHLALVHSRFSTNTFPSW 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,832
Number of Sequences: 27780
Number of extensions: 263278
Number of successful extensions: 756
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)