Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H17
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA...   121   4e-28
AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA...    95   2e-20
BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p pro...    91   4e-19
BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p pro...    41   6e-04
AE013599-3876|AAM68315.1|  240|Drosophila melanogaster CG3494-PB...    27   9.7  
AE013599-3875|AAF47208.2|  240|Drosophila melanogaster CG3494-PA...    27   9.7  

>AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA
           protein.
          Length = 93

 Score =  121 bits (291), Expect = 4e-28
 Identities = 56/82 (68%), Positives = 60/82 (73%)
 Frame = +3

Query: 3   RRNHPHXLCIICGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIV 182
           R N  H LC  CG SSYHIQKS CAQCGYPAAKLRSY+WSVKA          M+HLK+V
Sbjct: 11  RHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVV 70

Query: 183 RRRFRNGFKEGKPTPPKKAVAS 248
           RRRFRNGF+EG    PKKAVAS
Sbjct: 71  RRRFRNGFREGTQAKPKKAVAS 92


>AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA
           protein.
          Length = 89

 Score = 95.5 bits (227), Expect = 2e-20
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = +3

Query: 3   RRNHPHXLCIICGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIV 182
           R N  H +C  CG SSYH+QKSKC+QCGYPAAK RS++WS KA          MR+LK +
Sbjct: 11  RHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNL 70

Query: 183 RRRFRNGFKEG 215
           RRRFRNG +EG
Sbjct: 71  RRRFRNGLREG 81


>BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p
           protein.
          Length = 89

 Score = 91.5 bits (217), Expect = 4e-19
 Identities = 41/71 (57%), Positives = 49/71 (69%)
 Frame = +3

Query: 3   RRNHPHXLCIICGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIV 182
           R N  H +C  CG SSYH+QKSKC+Q GYPAAK RS++WS KA          MR+LK +
Sbjct: 11  RHNKTHTICRRCGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNL 70

Query: 183 RRRFRNGFKEG 215
           RRRFRNG +EG
Sbjct: 71  RRRFRNGLREG 81


>BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p
          protein.
          Length = 103

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 3  RRNHPHXLCIICGISSYHIQKSKCAQ 80
          R N  H +C  CG SSYH+QKSKC+Q
Sbjct: 11 RHNKTHTICRRCGNSSYHLQKSKCSQ 36


>AE013599-3876|AAM68315.1|  240|Drosophila melanogaster CG3494-PB,
           isoform B protein.
          Length = 240

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 5   PKSSPXVMHHLWYLVISHSKIKMRPMWIS-CSKITXLPL 118
           PK  P +  HL  LV++ ++I   P  IS  SK+T L L
Sbjct: 77  PKDLPLLSEHLTQLVLNKNQISFVPTNISQYSKLTNLSL 115


>AE013599-3875|AAF47208.2|  240|Drosophila melanogaster CG3494-PA,
           isoform A protein.
          Length = 240

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 5   PKSSPXVMHHLWYLVISHSKIKMRPMWIS-CSKITXLPL 118
           PK  P +  HL  LV++ ++I   P  IS  SK+T L L
Sbjct: 77  PKDLPLLSEHLTQLVLNKNQISFVPTNISQYSKLTNLSL 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,725,695
Number of Sequences: 53049
Number of extensions: 211153
Number of successful extensions: 506
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)