Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H14
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical p...   118   6e-27
Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical pr...   111   7e-25
AC006674-9|AAF39935.1|  178|Caenorhabditis elegans Hypothetical ...    29   3.9  
AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z82279-2|CAB05260.2|  256|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AY151209-1|AAN72826.1|  256|Caenorhabditis elegans COG-1A protein.     28   8.9  

>U21324-13|AAA62558.1|  357|Caenorhabditis elegans Hypothetical
           protein C35D10.2 protein.
          Length = 357

 Score =  118 bits (283), Expect = 6e-27
 Identities = 56/128 (43%), Positives = 79/128 (61%)
 Frame = +2

Query: 404 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 583
           E++ S    V N       QL F CQ AHGSP+G+I  ++N++ELY+ IA+C+  S +DI
Sbjct: 43  EESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKWNNMEELYQSIADCFTISKDDI 102

Query: 584 LFCTLNTHKVDMKKLLGGQIGLXDFIFAHRKGRPKEIXIVKTEDALGLTITDNGAGYAFI 763
           +F T+N  K DMK +  G +   D +FAH +G+  E+ +VK     G+TITDNG G AFI
Sbjct: 103 IFLTVNDFKPDMKNMFTGTLNFKDMLFAHIRGQATELRVVKDAKNFGVTITDNGLGNAFI 162

Query: 764 KRIKEGSI 787
           K I   S+
Sbjct: 163 KVISPDSV 170


>Z68298-3|CAA92600.2|  357|Caenorhabditis elegans Hypothetical
           protein F44D12.4 protein.
          Length = 357

 Score =  111 bits (266), Expect = 7e-25
 Identities = 52/128 (40%), Positives = 78/128 (60%)
 Frame = +2

Query: 404 EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 583
           E+  S    V N       +L F CQ AHGSP+ +I  +++++ELY+ IA+ +  S +DI
Sbjct: 43  EEPSSSIMPVVNPLMVAAKELKFPCQLAHGSPVAIIDKWNDMEELYQSIADFFAISKDDI 102

Query: 584 LFCTLNTHKVDMKKLLGGQIGLXDFIFAHRKGRPKEIXIVKTEDALGLTITDNGAGYAFI 763
           +F T+N  K DMK +  G +   D +FAH +G+  E+ +VK  +  G+T+TDNG G AFI
Sbjct: 103 IFLTVNDFKPDMKNMFSGTLNFKDMLFAHVRGQATELRMVKDANVFGVTVTDNGLGNAFI 162

Query: 764 KRIKEGSI 787
           K I  GS+
Sbjct: 163 KVISPGSV 170


>AC006674-9|AAF39935.1|  178|Caenorhabditis elegans Hypothetical
           protein K12H6.5 protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +3

Query: 366 LNTRRHRYHPHQSKILNHSLMELIIATV---RRSHNWSSTVSKLTEVHWASSLVSLTSKN 536
           +N   HR+HPH   + + + + L++A V     S+      +KL ++H    L++ +S  
Sbjct: 48  INHPTHRHHPHHPTMTSSTTILLLLALVGFSSGSYMSQENSAKLAQLHLNMVLLASSSHE 107

Query: 537 Y 539
           Y
Sbjct: 108 Y 108


>AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical
           protein Y53F4B.1 protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +3

Query: 348 YLKRKRLNTRRHRYHPHQSKILNHSLMELIIATVRRSHNWSSTVSKLTEVHWASSLVSLT 527
           YL  +  +TRR   +  + + L+H  +   I+  RR+   S+ +S L+E   ++  +S+T
Sbjct: 310 YLSLRGTDTRRLEANNEREEFLDHYRIPRKISVHRRTTTTSTCIS-LSETSGSNQDISVT 368

Query: 528 SKNYM 542
           S  Y+
Sbjct: 369 SAAYL 373


>Z82279-2|CAB05260.2|  256|Caenorhabditis elegans Hypothetical
           protein R03C1.3a protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 570 ENS*HSAIFSYNSLTLEKPEMRPNG 496
           EN  HS+ +S ++L LEK E  P+G
Sbjct: 20  ENRKHSSTYSISNLLLEKKESSPSG 44


>AY151209-1|AAN72826.1|  256|Caenorhabditis elegans COG-1A protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 570 ENS*HSAIFSYNSLTLEKPEMRPNG 496
           EN  HS+ +S ++L LEK E  P+G
Sbjct: 20  ENRKHSSTYSISNLLLEKKESSPSG 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,355,312
Number of Sequences: 27780
Number of extensions: 357761
Number of successful extensions: 791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)