Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H13
         (362 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q03Q71 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_A2DRZ5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_Q8IBI4 Cluster: Modification methylase-like protein, pu...    31   8.3  
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ...    31   8.3  

>UniRef50_Q03Q71 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus brevis ATCC 367|Rep: Putative
           uncharacterized protein - Lactobacillus brevis (strain
           ATCC 367 / JCM 1170)
          Length = 283

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 27  FVK--VYYNIYDKYNN*QKLHITNLDKKNPPSN*FLENIKNYNSV 155
           FVK  VYYN YD+Y +   L I N  K NP        + NY  +
Sbjct: 203 FVKPLVYYNYYDRYEHSNSLVIGNKTKLNPRDAYNCTAVANYQDL 247


>UniRef50_A2DRZ5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 451

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 33  KVYYNIYDKYNN*QKLHIT--NLDKKNPPSN*FLENIKNYNSVKIS 164
           K+Y+N+Y K+    +L +T  +L ++   +   L+ I NYNS+ I+
Sbjct: 328 KLYFNLYSKFGGYGQLFVTVHDLIREKVSNQETLKQISNYNSLNIA 373


>UniRef50_Q8IBI4 Cluster: Modification methylase-like protein,
           putative; n=1; Plasmodium falciparum 3D7|Rep:
           Modification methylase-like protein, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 706

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  ITNLDKKNPPSN*FLENIKNYNSVKISLM*IKYCTFCNYGMR 209
           +T +D KN P   F+EN+KN+  +  S +   YC   NY  +
Sbjct: 267 LTKVDFKNLPEYIFIENVKNF-ELSSSFIYFLYCIKNNYSFQ 307


>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1834

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 16/58 (27%), Positives = 32/58 (55%)
 Frame = +3

Query: 21   SVFVKVYYNIYDKYNN*QKLHITNLDKKNPPSN*FLENIKNYNSVKISLM*IKYCTFC 194
            +++ K +Y IY  + N   ++I  ++K N  +N ++ +  NY  ++  L+  KY  FC
Sbjct: 997  NIYHKKFY-IYAFFFNLIDVYIKFVEKYNNKNNTYIPSFLNYKLIQAFLLFFKYSWFC 1053


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,985,151
Number of Sequences: 1657284
Number of extensions: 3651092
Number of successful extensions: 6357
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6354
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)