Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H13
         (362 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   2.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VIIFNIFKKLIGRWVLLV*ICNM 81
           V+ FN+   L+G+W+  + +C +
Sbjct: 89  VMPFNVAYLLLGKWIFGIHLCKL 111


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VIIFNIFKKLIGRWVLLV*ICNM 81
           V+ FN+   L+G+W+  + +C +
Sbjct: 89  VMPFNVAYLLLGKWIFGIHLCKL 111


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VIIFNIFKKLIGRWVLLV*ICNM 81
           V+ FN+   L+G+W+  + +C +
Sbjct: 89  VMPFNVAYLLLGKWIFGIHLCKL 111


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 60  YNN*QKLHITNLDKKNPPS 116
           Y +   +H  N++KK PPS
Sbjct: 327 YASRSDMHSDNIEKKYPPS 345


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 60  YNN*QKLHITNLDKKNPPS 116
           Y +   +H  N++KK PPS
Sbjct: 327 YASRSDMHSDNIEKKYPPS 345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +3

Query: 72  QKLHITNLDKKN 107
           +++H+TN+D+ N
Sbjct: 656 ERVHVTNMDQYN 667


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,661
Number of Sequences: 438
Number of extensions: 1516
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)