Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H12
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.81 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 58  ALYSIFINFSIHNLTVGNLYVFKKYIKIY*TNQALHFPKWLLTWI*KVLKNFRNILVQLI 237
           +L S+ +   + ++ +G+L   K++ K+   N+  +  + L T   K    F+N   QL+
Sbjct: 82  SLDSLILLMVLVSIILGSLKT-KEWAKL--NNKFQYIDEKLKTRDQKERNLFKNAYFQLV 138

Query: 238 LVVPLYFFTLAVQNYL-MAIAGAPT 309
           L + +Y  ++    Y+ +A  G PT
Sbjct: 139 LSISVYSSSVGYTQYVRIAAKGLPT 163


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 7   TIISASHSLSVMLIFPHALYSIFINFSIHNLTVGNLYVF 123
           TI    + + ++L+  +  Y  FI F++H L +  +Y F
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF 261


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 186 LDLKGFEEFSKYTRAID 236
           L+L+GF  + KY +A++
Sbjct: 36  LELEGFNFWGKYQKAVE 52


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 186 LDLKGFEEFSKYTRAID 236
           L+L+GF  + KY +A++
Sbjct: 196 LELEGFNFWGKYQKAVE 212


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 186 LDLKGFEEFSKYTRAID 236
           L+L+GF  + KY +A++
Sbjct: 196 LELEGFNFWGKYQKAVE 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,717
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)