Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H10
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AF016452-4|AAB66015.1|  539|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    28   7.8  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
           protein T12D8.1 protein.
          Length = 2561

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 11  SRCLHLSHNVPSNSAKTTQSLSIVLASLRACP 106
           SRC   +H   S +  T+Q L    ASLR CP
Sbjct: 611 SRCRRCNHKAASGNDLTSQGLCFPCASLRKCP 642


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
           protein T12D8.1 protein.
          Length = 2561

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 11  SRCLHLSHNVPSNSAKTTQSLSIVLASLRACP 106
           SRC   +H   S +  T+Q L    ASLR CP
Sbjct: 611 SRCRRCNHKAASGNDLTSQGLCFPCASLRKCP 642


>AF016452-4|AAB66015.1|  539|Caenorhabditis elegans Hypothetical
           protein T05H4.9 protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 98  HASLPRQLTMIVLFWQSWKE 39
           HASLP++L MIV  W S+K+
Sbjct: 357 HASLPKRLLMIVDSWPSFKD 376


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 25  FVSQRSFQLCQNNTIIVNCLGKLACXSCFASLGRKQC 135
           +  ++  Q+C+N    V+C  K +C  C  S G  +C
Sbjct: 617 YTGEKCEQICRNGYWGVDCAHKCSCKLCDPSTGSCRC 653


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 25  FVSQRSFQLCQNNTIIVNCLGKLACXSCFASLGRKQC 135
           +  ++  Q+C+N    V+C  K +C  C  S G  +C
Sbjct: 617 YTGEKCEQICRNGYWGVDCAHKCSCKLCDPSTGSCRC 653


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,789,525
Number of Sequences: 27780
Number of extensions: 324186
Number of successful extensions: 794
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)