Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H09
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 71 6e-14
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 66 2e-12
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 30 0.20
SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces po... 28 0.60
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 0.60
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 27 1.0
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 2.4
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 26 3.2
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 26 3.2
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 25 5.6
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 25 5.6
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 25 5.6
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 25 5.6
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 25 7.3
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 25 7.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 7.3
SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyce... 25 7.3
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 24 9.7
SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces pombe... 24 9.7
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 71.3 bits (167), Expect = 6e-14
Identities = 43/134 (32%), Positives = 66/134 (49%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLMHQAALL 235
VIGGGSGGLA A+ A GAKV +++ LGGTCVN GC+PKK+M A L
Sbjct: 12 VIGGGSGGLASARRAAKHGAKVALIE--------ASGRLGGTCVNYGCVPKKIMWNIADL 63
Query: 236 GESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIXYVNGLGEF 415
+ A G+ P+ +W + +I +N + ++ + + Y++G F
Sbjct: 64 VAKMKTAKQNGF--PNSQLGSFDWGMIKRKRDAYIGRLNGIYERNVNKDGVAYISGHASF 121
Query: 416 KDPHTLIATLXNGS 457
P + + +GS
Sbjct: 122 VSPTEVAVDMNDGS 135
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 66.1 bits (154), Expect = 2e-12
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKK-LMHQAAL 232
VIGGG GG A LG K ++ +GT LGGTC+NVGCIP K L++ + +
Sbjct: 50 VIGGGPGGYVAAIRGAQLGLKTICVE-----KRGT---LGGTCLNVGCIPSKALLNNSHI 101
Query: 233 LGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIXYVNGLGE 412
H+ G +V + +N + +A + +KS+ ++ K+ Y G G
Sbjct: 102 YHTVKHDTKRRGIDV---SGVSVNLSQMMKAKDDSVKSLTSGIEYLFKKNKVEYAKGTGS 158
Query: 413 FKDPHTL 433
F DP TL
Sbjct: 159 FIDPQTL 165
Score = 25.8 bits (54), Expect = 3.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAKVTVLDYV 139
V+GGG GL LGA+VTV++++
Sbjct: 222 VLGGGIIGLEMGSVWSRLGAEVTVVEFL 249
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 29.9 bits (64), Expect = 0.20
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAKVTVL 130
VIGGG G+ A A LGAK T+L
Sbjct: 21 VIGGGHAGVEAAAAASRLGAKTTLL 45
>SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 28.3 bits (60), Expect = 0.60
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 275 VPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLR 376
V +LD + ++ + VQN +K+ +W R+D+R
Sbjct: 245 VTALDILSSSFSIMLPHVQNGVKNTSWPGRLDIR 278
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 0.60
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 134 SPTQSL*HPSSQPPWRRPXHRSHLR---LQPEQRRMCLCWPAXALPP 3
+P S+ +PSS PPW++P +S ++ L P Q + + LPP
Sbjct: 450 APALSM-NPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPP 495
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 27.5 bits (58), Expect = 1.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 367 NSGHPVHRFYVILYSLS*RWPVYLDRV 287
N G P+H FY+ + + RW +LD +
Sbjct: 343 NEGSPMHAFYIPSLNPAPRWCSFLDNI 369
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 2.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAK 118
+IG G G++CA++ NL A+
Sbjct: 262 IIGAGMAGISCARQLTNLFAQ 282
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 168 PHLVPCGEGVT*SNTVTLAPKFTASLAQAXPPEPPP 61
P ++P GE V + P+ +A PE PP
Sbjct: 415 PPILPVGESVCLPPRTSAKPRIAEGIASLLNPEEPP 450
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 418 LKLTQTVNVXYFLFPQVNSGHPVHRFY 338
LK + +V F+F QVNS H H+ +
Sbjct: 203 LKSREPTDVELFMFGQVNSEHCRHKIF 229
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 239 ESIHEAVAYGWEVPSLDAIK 298
+SI +GWE+P LD +K
Sbjct: 483 QSIRITKFFGWELPMLDRVK 502
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 5.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 56 VIGGGSG-GLACAKEAVNLGAKVTVL 130
V GG G G A AKE V GA VT++
Sbjct: 27 VTGGSQGLGKAIAKELVLRGANVTIV 52
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 444 KVAISVWGSLNSPKP 400
+ A+ WGSLNS KP
Sbjct: 225 RAALLAWGSLNSSKP 239
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 25.0 bits (52), Expect = 5.6
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 278 PSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIXYVNGLGEFKDPHTLIATLXNGS 457
P D++ ++ L + ++ K VNW+ L++ + L +DP+ L TL + S
Sbjct: 50 PKRDSLSLDDIVLQKYKPSY-KQVNWIDSQGLKDTFLVKYGDLINIQDPYNLNKTLFSVS 108
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 24.6 bits (51), Expect = 7.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 179 TCVNVGCIPKKLMHQAALL 235
TC +G +PK L++Q L+
Sbjct: 4 TCTKIGTVPKVLVNQKGLI 22
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 234 LERAYMKRLHTVGR 275
LER+ +KRLH VGR
Sbjct: 195 LERSNLKRLHIVGR 208
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 111 PKFTASLAQAXPPEPPP-ITARAEADVPVLAS 19
P ++S A + PP PPP I R+ +P L +
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
>SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 24.6 bits (51), Expect = 7.3
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 171 RPHLVPCGEGVT 136
RPH+V CG+GV+
Sbjct: 168 RPHMVYCGDGVS 179
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 24.2 bits (50), Expect = 9.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 56 VIGGGSGGLACAKEAVNLGAKVTVL---DYVT-PSPQGTKWGLGG 178
+IGGG+ G A +A G V +L D+ + S + TK GG
Sbjct: 72 IIGGGATGTGVAVDASTRGLNVCLLEKTDFASETSSKSTKMAHGG 116
>SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 329
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 9/36 (25%)
Frame = -2
Query: 104 SQPPWRRPXHR--SH-------LRLQPEQRRMCLCW 24
S PP++RP R +H + L P R CLCW
Sbjct: 220 SLPPYQRPFLRGITHSIFVDLFIFLSPSSARHCLCW 255
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,947,335
Number of Sequences: 5004
Number of extensions: 39385
Number of successful extensions: 115
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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