Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H08
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 39  FPRCGSHNP 65
           FPRCG+H P
Sbjct: 699 FPRCGNHLP 707


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 661 NAENVSNKALLSIDLSRFFIKTFPTPDLRREGSRW 557
           N +   N    S+  +  F+K   TPD   +GS W
Sbjct: 180 NQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFW 214


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -2

Query: 443 TGNHIATNTYR*DGPSSRKFFKQHGLGYIRV*ISNIQRCHRITWW 309
           T NH + NTY   G      +K  G   +   I+N+     ++ W
Sbjct: 342 TKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAW 386


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -2

Query: 443 TGNHIATNTYR*DGPSSRKFFKQHGLGYIRV*ISNIQRCHRITWW 309
           T NH + NTY   G      +K  G   +   I+N+     ++ W
Sbjct: 234 TKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAW 278


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 282 IQFHRNINRLQMQNFTFSLYDYR 214
           + F+R + RL ++++T S  +YR
Sbjct: 320 LAFNRELPRLLLRHYTASSKNYR 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,891
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)