Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H08
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 272 2e-73
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 272 2e-73
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 272 2e-73
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 272 2e-73
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 178 4e-53
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 181 6e-46
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 110 1e-24
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 110 1e-24
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 86 2e-17
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 67 1e-11
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 67 1e-11
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 67 1e-11
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 67 1e-11
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 67 1e-11
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 67 1e-11
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 64 9e-11
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 62 5e-10
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 61 1e-09
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 61 1e-09
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 60 2e-09
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 58 7e-09
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 57 2e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 57 2e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 57 2e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 55 7e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 51 9e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 51 1e-06
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 51 1e-06
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 49 5e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 6e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 45 6e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 45 6e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 45 6e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 44 2e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 42 4e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 41 0.001
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 41 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.002
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 40 0.003
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 40 0.003
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.009
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 38 0.009
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 38 0.011
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 38 0.011
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.011
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 38 0.011
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 38 0.011
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 38 0.011
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 37 0.015
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.020
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.020
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.020
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.020
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.020
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 37 0.020
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 37 0.020
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 37 0.020
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 36 0.034
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.046
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.060
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 35 0.060
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.060
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.060
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.060
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.18
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.18
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.18
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 33 0.18
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.24
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.24
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.56
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.74
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.74
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.74
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 0.98
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 30 1.7
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 30 2.3
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 30 2.3
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 4.0
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 29 4.0
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 29 4.0
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 272 bits (667), Expect = 2e-73
Identities = 125/170 (73%), Positives = 144/170 (84%)
Frame = +3
Query: 303 PGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQP 482
P +Y MASLY+GDLH D++EAMLFEKFS AGPVLSIRVCRD +R SLGYAYVNFQQP
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 483 TDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF 662
DAERALDTMNF++I GRP+RIMWSQRDP+ R++G GN+FIKNLD+ IDNK+++DTFS F
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLF 168
Query: 663 GNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYVG 812
GNILSCKV D+ G SKGYGFVHFETE A +IEKVNGML + K VYVG
Sbjct: 169 GNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVG 218
Score = 82.6 bits (195), Expect = 3e-16
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQTAIEK 204
Query: 510 MNFDIIKGRPIRI----MWSQRDPSLRKSGVG--NVFIKNLDKSIDNKALFDTFSAFGNI 671
+N ++ + + + +QR L +SG+ NVF+KN + +D + L FS FG I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 672 LSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
S V D G KG+GFV F + A +++EK+N + G
Sbjct: 265 TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEG 305
Score = 71.3 bits (167), Expect = 7e-13
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Frame = +3
Query: 306 GPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPT 485
G +++V + + + L FS G + S V D + G+ +V F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQD 289
Query: 486 DAERALDTMNFDIIKGRPIRIMW------SQRDPSLRKS-------------GVGNVFIK 608
A +A++ +N I++G ++ S+R L++ GV N+++K
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV-NLYVK 348
Query: 609 NLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLX 788
N+++ +++ L D FS+FG I S KV DE G SKG+GFV FE A ++ +N +
Sbjct: 349 NIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMI 408
Query: 789 NGKMVYV 809
K +YV
Sbjct: 409 GAKPLYV 415
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 272 bits (667), Expect = 2e-73
Identities = 125/170 (73%), Positives = 144/170 (84%)
Frame = +3
Query: 303 PGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQP 482
P +Y MASLY+GDLH D++EAMLFEKFS AGPVLSIRVCRD +R SLGYAYVNFQQP
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 483 TDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF 662
DAERALDTMNF++I GRP+RIMWSQRDP+ R++G GN+FIKNLD+ IDNK+++DTFS F
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLF 168
Query: 663 GNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYVG 812
GNILSCKV D+ G SKGYGFVHFETE A +IEKVNGML + K VYVG
Sbjct: 169 GNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVG 218
Score = 82.6 bits (195), Expect = 3e-16
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQTAIEK 204
Query: 510 MNFDIIKGRPIRI----MWSQRDPSLRKSGVG--NVFIKNLDKSIDNKALFDTFSAFGNI 671
+N ++ + + + +QR L +SG+ NVF+KN + +D + L FS FG I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 672 LSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
S V D G KG+GFV F + A +++EK+N + G
Sbjct: 265 TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEG 305
Score = 71.3 bits (167), Expect = 7e-13
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Frame = +3
Query: 306 GPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPT 485
G +++V + + + L FS G + S V D + G+ +V F
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQD 289
Query: 486 DAERALDTMNFDIIKGRPIRIMW------SQRDPSLRKS-------------GVGNVFIK 608
A +A++ +N I++G ++ S+R L++ GV N+++K
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV-NLYVK 348
Query: 609 NLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLX 788
N+++ +++ L D FS+FG I S KV DE G SKG+GFV FE A ++ +N +
Sbjct: 349 NIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMI 408
Query: 789 NGKMVYV 809
K +YV
Sbjct: 409 GAKPLYV 415
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 272 bits (667), Expect = 2e-73
Identities = 124/166 (74%), Positives = 142/166 (85%)
Frame = +3
Query: 315 SYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE 494
SY MASLYVGDLH D+ E++LFEKFS AGPVLSIRVCRD TR SLGYAYVNFQQP DAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 495 RALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNIL 674
RA+DTMNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK+++DTFS FGNIL
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 675 SCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYVG 812
SCKV DE G SKGYGFVHFETE A +I+KVNGML GK V+VG
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG 193
Score = 80.2 bits (189), Expect = 2e-15
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Frame = +3
Query: 306 GPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPT 485
G + ++YV + + L + F+ G + S V + +S G+ +V F P
Sbjct: 206 GETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPE 263
Query: 486 DAERALDTMNFDIIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIK 608
+AE A+ ++ I+G +++ S+R L+K GV N+++K
Sbjct: 264 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVK 322
Query: 609 NLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLX 788
NLD+++D+ L F ++GNI S KV DE G SKG+GFV FE A ++ ++N +
Sbjct: 323 NLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 382
Query: 789 NGKMVYV 809
K +YV
Sbjct: 383 CSKPLYV 389
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 510 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALFDTFSAFGNI 671
+N ++ G+ + + +QR+ L ++ NV++KN + + L F+ FGNI
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNI 239
Query: 672 LSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
SC+V E G SKG+GFV F A +++ ++ G
Sbjct: 240 TSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHDSTIEG 279
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 272 bits (667), Expect = 2e-73
Identities = 124/166 (74%), Positives = 142/166 (85%)
Frame = +3
Query: 315 SYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE 494
SY MASLYVGDLH D+ E++LFEKFS AGPVLSIRVCRD TR SLGYAYVNFQQP DAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 495 RALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNIL 674
RA+DTMNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK+++DTFS FGNIL
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 675 SCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYVG 812
SCKV DE G SKGYGFVHFETE A +I+KVNGML GK V+VG
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG 193
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Frame = +3
Query: 342 GDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFD 521
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ ++
Sbjct: 221 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 275
Query: 522 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKSIDNKALF 644
I+G +++ S+R L+K GV N+++KNLD+++D+ L
Sbjct: 276 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 334
Query: 645 DTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
F ++GNI S KV DE G SKG+GFV FE A ++ ++N + K +YV
Sbjct: 335 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV 389
Score = 69.3 bits (162), Expect = 3e-12
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 510 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALFDTFSAFGNI 671
+N ++ G+ + + +QR+ L ++ NV++KN + + L F+ FGNI
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 239
Query: 672 LSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
SC+V E G SKG+GFV F A +++ ++ G
Sbjct: 240 TSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHDSTIEG 279
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 178 bits (434), Expect(2) = 4e-53
Identities = 79/102 (77%), Positives = 91/102 (89%)
Frame = +3
Query: 315 SYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE 494
SY MASLYVGDLH D+ E++LFEKFS AGPVLSIRVCRD TR SLGYAYVNFQQP DAE
Sbjct: 28 SYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAE 87
Query: 495 RALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 620
RA+DTMNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDK 129
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Frame = +3
Query: 342 GDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFD 521
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ ++
Sbjct: 161 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 215
Query: 522 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKSIDNKALF 644
I+G +++ S+R L+K GV N+++KNLD+++D+ L
Sbjct: 216 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 274
Query: 645 DTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
F ++GNI S KV DE G SKG+GFV FE A ++ ++N + K +YV
Sbjct: 275 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV 329
Score = 48.0 bits (109), Expect(2) = 4e-53
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKV 773
NV++KN + + L F+ FGNI SC+V E G SKG+GFV F A +++ +
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 212
Query: 774 NGMLXNG 794
+ G
Sbjct: 213 HDSTIEG 219
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 588 VGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSI 764
+ ++++ +L ++ LF+ FSA G +LS +V +D T S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 765 EKVNGMLXNGK 797
+ +N +GK
Sbjct: 91 DTMNFEALHGK 101
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 181 bits (440), Expect = 6e-46
Identities = 80/112 (71%), Positives = 95/112 (84%)
Frame = +3
Query: 477 QPTDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFS 656
QP DAERA+DTMNF+ + G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK+++DTFS
Sbjct: 19 QPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFS 78
Query: 657 AFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYVG 812
FGNILSCKV DE G SKGYGFVHFETE A +I+KVNGML GK V+VG
Sbjct: 79 LFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG 130
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Frame = +3
Query: 342 GDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFD 521
GD ++ T LF KF G + S V + +S G+ +V F P +AE A+ ++
Sbjct: 158 GDHYNKETLEKLFAKF---GNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDS 212
Query: 522 IIKGRPIRI------MWSQRDPSLRKS-------------GVGNVFIKNLDKSIDNKALF 644
I+G +++ S+R L+K GV N+++KNLD+++D+ L
Sbjct: 213 TIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGV-NLYVKNLDETVDDDGLK 271
Query: 645 DTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
F ++GNI S KV DE G SKG+GFV FE A ++ ++N + K +YV
Sbjct: 272 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV 326
Score = 69.3 bits (162), Expect = 3e-12
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
++++ +L I +++ FS G +LS +V D S GY +V+F+ A+ A+
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 116
Query: 510 MNFDIIKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALFDTFSAFGNI 671
+N ++ G+ + + +QR+ L ++ NV++KN + + L F+ FGNI
Sbjct: 117 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 672 LSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
SC+V E G SKG+GFV F A +++ ++ G
Sbjct: 177 TSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHDSTIEG 216
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 110 bits (264), Expect = 1e-24
Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
A++YVG L ++E++L+E AGPV+S+ + +D +T G+ +V F DA+ A+
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Query: 507 TMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALFDTFSAFGNILSC- 680
+N + G+PI++ ++ + VG N+F+ NLD +D K L+DTFSAFG IL
Sbjct: 73 ILNMIKLYGKPIKV--NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVP 130
Query: 681 KVXQD-ETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
K+ +D ++G SKG+ F++F + ++ ++E +NG + + V
Sbjct: 131 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITV 174
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/89 (29%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSI-RVCRDMITRRSLGYAYVNFQQPTDAERAL 503
A+++VG+L ++ E +L++ FS G +L + ++ RD+ + S G+A++NF ++ AL
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
Query: 504 DTMNFDIIKGRPIRIMWS-QRDPSLRKSG 587
+ MN + R I + ++ +RD + G
Sbjct: 160 EAMNGQFLCNRAITVSYAFKRDSKGERHG 188
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 110 bits (264), Expect = 1e-24
Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
A++YVG L ++E++L+E AGPV+S+ + +D +T G+ +V F DA+ A+
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Query: 507 TMNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALFDTFSAFGNILSC- 680
+N + G+PI++ ++ + VG N+F+ NLD +D K L+DTFSAFG IL
Sbjct: 83 ILNMIKLYGKPIKV--NKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVP 140
Query: 681 KVXQD-ETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
K+ +D ++G SKG+ F++F + ++ ++E +NG + + V
Sbjct: 141 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITV 184
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/89 (29%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSI-RVCRDMITRRSLGYAYVNFQQPTDAERAL 503
A+++VG+L ++ E +L++ FS G +L + ++ RD+ + S G+A++NF ++ AL
Sbjct: 110 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
Query: 504 DTMNFDIIKGRPIRIMWS-QRDPSLRKSG 587
+ MN + R I + ++ +RD + G
Sbjct: 170 EAMNGQFLCNRAITVSYAFKRDSKGERHG 198
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 87.0 bits (206), Expect = 1e-17
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+LYVG+L S +TE + F+ G V +V D + YA+V F A +AL T
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQT 103
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-----NVFIKNLDKSIDNKALFDTFSAFGNIL 674
MN ++ R +++ W+ +P ++S + +VF+ +L +DN+ L + F FG++
Sbjct: 104 MNKRLLLDREMKVNWAV-EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162
Query: 675 SCKVXQD-ETGASKGYGFVHFETEXXANKSIEKVNG 779
KV +D T SKGYGFV + A ++IE++NG
Sbjct: 163 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Score = 69.7 bits (163), Expect = 2e-12
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF-GNILSCKVX 689
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIASLTED 254
Query: 690 QDETGAS-------------KGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ G + +GY FV F+ + A K+I ++N G++V
Sbjct: 255 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ S +TE + + F++ G + +R+ + GYA+V F A +A+
Sbjct: 242 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 294
Query: 510 MNFDIIKGRPIRIMWSQ 560
MN + G+ +R W +
Sbjct: 295 MNNQDVGGQLVRCSWGK 311
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/156 (29%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L + L +T+ + F++ G + S ++ RD +T +SLGY +VN+ + DA RA+ +
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVX 689
N ++ + I++ +++ PS + N+++ + KS+ L F FG I++ ++
Sbjct: 103 FNGLRLQNKTIKVSYAR--PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRIL 160
Query: 690 QDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
D TG SKG GFV F+ + A+ +I+ +NG + +G
Sbjct: 161 SDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSG 196
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+ I L + + + + F++ G I SCK+ +D+ TG S GYGFV++ E A +++
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 771 VNGMLXNGKMVYV 809
NG+ K + V
Sbjct: 103 FNGLRLQNKTIKV 115
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
+F+ NL D+ L+ FS FG I++ K+ +D T KGY FV A ++ +N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 777 GMLXNGKMVYV 809
G GK + V
Sbjct: 436 GTNLAGKTLQV 446
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL D++ +L F+ G V +V RD+ T++S GY +V+F +AE A+ M
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 513 NFDIIKGRPIRIMWSQRDPS--------------LRKSGVGNVFIKNLDKSIDNKALFDT 650
N I R +R W+ R S K+ +V++ N+ + + L D
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 651 FSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
FS +G+I ++ + ++ Y FV +E + A K+I ++NG G V
Sbjct: 257 FSTYGDIAEVRIFK-----TQRYAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
+VF+ +L K + N+ L TF+ FG + KV +D +T SKGYGFV F + A +I
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 771 VNG 779
+NG
Sbjct: 196 MNG 198
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/77 (31%), Positives = 43/77 (55%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ T+A L + FST G + +R+ + T+R YA+V +++ A +A+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK---TQR---YAFVRYEKKECATKAIME 291
Query: 510 MNFDIIKGRPIRIMWSQ 560
MN + G +R W +
Sbjct: 292 MNGKEMAGNQVRCSWGR 308
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 69.7 bits (163), Expect = 2e-12
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF-GNILSCKVX 689
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIASLTED 141
Query: 690 QDETGAS-------------KGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ G + +GY FV F+ + A K+I ++N G++V
Sbjct: 142 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
+VF+ +L +DN+ L + F FG++ KV +D T SKGYGFV + A ++IE+
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 771 VNG 779
+NG
Sbjct: 83 MNG 85
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ S +TE + + F++ G + +R+ + GYA+V F A +A+
Sbjct: 129 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 181
Query: 510 MNFDIIKGRPIRIMWSQ 560
MN + G+ +R W +
Sbjct: 182 MNNQDVGGQLVRCSWGK 198
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 69.7 bits (163), Expect = 2e-12
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF-GNILSCKVX 689
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIASLTED 151
Query: 690 QDETGAS-------------KGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ G + +GY FV F+ + A K+I ++N G++V
Sbjct: 152 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 58.0 bits (134), Expect = 7e-09
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Frame = +3
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-----NVFIKNLDKSIDNKALFDTFSAFGNIL 674
MN ++ R +++ W+ +P ++S + +VF+ +L +DN+ L + F FG++
Sbjct: 1 MNKRLLLDREMKVNWAV-EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 59
Query: 675 SCKVXQD-ETGASKGYGFVHFETEXXANKSIEKVNG 779
KV +D T SKGYGFV + A ++IE++NG
Sbjct: 60 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ S +TE + + F++ G + +R+ + GYA+V F A +A+
Sbjct: 139 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 191
Query: 510 MNFDIIKGRPIRIMWSQ 560
MN + G+ +R W +
Sbjct: 192 MNNQDVGGQLVRCSWGK 208
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 69.7 bits (163), Expect = 2e-12
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL S++ L E F G V +V RD T +S GY +V++ + +AERA++ M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAF-GNILSCKVX 689
N + R IR W+ R P ++ + K+ D+ I N+ D S + GNI S
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEK-PSHYNEKSYDE-IYNQTSGDNTSVYVGNIASLTED 222
Query: 690 QDETGAS-------------KGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ G + +GY FV F+ + A K+I ++N G++V
Sbjct: 223 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
+VF+ +L +DN+ L + F FG++ KV +D T SKGYGFV + A ++IE+
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 771 VNG 779
+NG
Sbjct: 164 MNG 166
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ S +TE + + F++ G + +R+ + GYA+V F A +A+
Sbjct: 210 SVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQ------GYAFVKFDNKDAAAKAIVQ 262
Query: 510 MNFDIIKGRPIRIMWSQ 560
MN + G+ +R W +
Sbjct: 263 MNNQDVGGQLVRCSWGK 279
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L +TF+ FG ILS KV D+ T SK +GFV +E A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 560 MNGFQIGSKRLKV 572
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L +TF+ FG ILS KV D+ T SK +GFV +E A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 560 MNGFQIGSKRLKV 572
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L +TF+ FG ILS KV D+ T SK +GFV +E A +I
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 489 MNGFQIGSKRLKV 501
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXA 752
+ F+ FG+I C V +D+ G S+G FV F A
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L +TF+ FG ILS KV D+ T SK +GFV +E A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 560 MNGFQIGSKRLKV 572
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Frame = +3
Query: 315 SYPMAS--LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
S P++S LY+ L + + +L E S G + S + D T GY +V+F+ P
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 489 AERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGN 668
A A+D +N + ++ + ++ ++DP+ N++I NL + L + FG
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQQQEQDPT-------NLYIANLPLDFTEQMLETELNKFGM 187
Query: 669 ILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNG 779
++S ++ + S+G GF +++ I +NG
Sbjct: 188 VISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/150 (24%), Positives = 71/150 (47%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+LY+ L + + +L E S G + S + D T GY +V+F+ P A A+D
Sbjct: 108 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 167
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVX 689
+N + ++ + ++ ++DP+ N++I NL + L + FG ++S ++
Sbjct: 168 LNTEGVQAQMAKLQQQEQDPT-------NLYIANLPLDFTEQMLETELNKFGMVISTRIL 220
Query: 690 QDETGASKGYGFVHFETEXXANKSIEKVNG 779
+ S+G GF +++ I +NG
Sbjct: 221 RTPDNQSRGVGFARMDSKEKCEVIISALNG 250
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 64.5 bits (150), Expect = 9e-11
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 30/187 (16%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VGDL S+I L E F G V ++ RD T + GY +V++ + DAERA+D M
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 513 NFDIIKGRPIRIMWSQRDPSL----------RKSGVG---NVFIKNLDKSID---NKALF 644
N + R IR W+ R P R+ G G + + +K+ D N+A
Sbjct: 194 NGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAA 253
Query: 645 DTFSAF-GNILSC-------------KVXQDETGASKGYGFVHFETEXXANKSIEKVNGM 782
D S + GNI + + + T +GY FV FET+ A ++I ++N
Sbjct: 254 DNTSVYVGNIANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNA 313
Query: 783 LXNGKMV 803
G++V
Sbjct: 314 DIGGQIV 320
Score = 63.7 bits (148), Expect = 2e-10
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L+V +L IT+ L F+ G V+ ++ + + YA+V F A AL +
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP---YAFVEFSDHNQATLALQS 97
Query: 510 MNFDIIKGRPIRIMWS--QRDPSLRKSGVG-----NVFIKNLDKSIDNKALFDTFSAFGN 668
N + + + + W+ R+P +S +VF+ +L ID+ L + F FG
Sbjct: 98 HNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGE 157
Query: 669 ILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNG 779
+ K+ +D T KGYGFV + A ++I+++NG
Sbjct: 158 VSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG++ +++ E + F GP+ +R T + GYA+V F+ A RA+
Sbjct: 257 SVYVGNI-ANLGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQ 309
Query: 510 MNFDIIKGRPIRIMWSQR----DPSLRKSGVG 593
MN I G+ +R W + PS R SG G
Sbjct: 310 MNNADIGGQIVRCSWGKSGDSGKPSERGSGGG 341
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 62.1 bits (144), Expect = 5e-10
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 464
N + +P P ++VG + E F G V S + RD T+ S G +
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 465 VNFQQPTDAERALDTM-NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
V F DA A + N +I+G + D R +FI L K + + L
Sbjct: 101 VTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENL 158
Query: 642 FDTFSAFGNILSCKVXQDETGASKG 716
+ F+ FG+I C V +D+ G S+G
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRG 183
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 60.9 bits (141), Expect = 1e-09
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 504 DTMNFDIIKGRPIRI---MWS---------QRDP---SLRKSG--VGNVFIKNLDKSIDN 632
++MN ++ GR +++ M+ Q P ++K V++ ++ +
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 633 KALFDTFSAFGNILSCKVXQDETG-ASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
L F AFG I+ C++ + TG +G+G++ F +++I +N G+ + V
Sbjct: 221 TDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
Query: 810 G 812
G
Sbjct: 281 G 281
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 60.9 bits (141), Expect = 1e-09
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 504 DTMNFDIIKGRPIRI---MWS---------QRDP---SLRKSG--VGNVFIKNLDKSIDN 632
++MN ++ GR +++ M+ Q P ++K V++ ++ +
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 633 KALFDTFSAFGNILSCKVXQDETG-ASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
L F AFG I+ C++ + TG +G+G++ F +++I +N G+ + V
Sbjct: 221 TDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
Query: 810 G 812
G
Sbjct: 281 G 281
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Frame = +3
Query: 273 EIVLNSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSL 452
E LN+ + S +++G L T L + F G V V RD T+R+
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 453 GYAYVNFQQPTDAERALDTMNFDIIKGRPI--RIMWSQRDPSLRKSGVGNVFIKNLDKSI 626
G+ ++ F P+ ++ L+ + + G+ I ++ + +R + + VFI L +
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATS 145
Query: 627 DNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ + F +G + + D+ T +G+GFV F+++ A+K E ++ NGKMV
Sbjct: 146 TLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE-IHFHEINGKMV 204
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Frame = +3
Query: 273 EIVLNSIKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSL 452
E LN+ + S +++G L T L + F G V V RD T+R+
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 453 GYAYVNFQQPTDAERALDTMNFDIIKGRPI--RIMWSQRDPSLRKSGVGNVFIKNLDKSI 626
G+ ++ F P+ ++ L+ + + G+ I ++ + +R + + VFI L +
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHE-LDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATS 145
Query: 627 DNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMV 803
+ + F +G + + D+ T +G+GFV F+++ A+K E ++ NGKMV
Sbjct: 146 TLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE-IHFHEINGKMV 204
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 58.0 bits (134), Expect = 7e-09
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
M+ +YVG + +I E ML F GP+ SI + D T +A+V ++ P A A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 504 DTMNFDIIKGRPIRI---MWS---------QRDP---SLRKSG--VGNVFIKNLDKSIDN 632
++MN ++ GR +++ M+ Q P ++K V++ ++ +
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 633 KALFDTFSAFGNILSCKVXQDETG-ASKGYGFVHFETEXXANKSIEKVN 776
L F AFG I+ C++ + TG +G+G++ F +++I +N
Sbjct: 221 TDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
+YV +H D++E L F G ++ ++ R R G+ Y+ F T A+ M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 513 NFDIIKGRPIR 545
N + G+ +R
Sbjct: 269 NMFDLGGQYLR 279
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F T+ + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 504 DTMNFDIIKGRPI--RIMWSQRDPSLRKSGVG--NVFIKNLDKSIDNKALFDTFSAFGNI 671
II G+ + + + D + +S V +++ + + L + F+ +G +
Sbjct: 82 -KQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 672 LSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
++ D+ T +G+GFV F+ ++ + + + M+ NG
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV-NG 181
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 564 DPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFET 740
D SL + +F+ L + + + + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 741 EXXANKSIEKVNGMLXNGKMV 803
+ + ++ K + +GK V
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTV 93
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F T+ + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 504 DTMNFDIIKGRPI--RIMWSQRDPSLRKSGVG--NVFIKNLDKSIDNKALFDTFSAFGNI 671
II G+ + + + D + +S V +++ + + L + F+ +G +
Sbjct: 82 -KQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 672 LSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
++ D+ T +G+GFV F+ ++ + + + M+ NG
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV-NG 181
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 564 DPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFET 740
D SL + +F+ L + + + + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 741 EXXANKSIEKVNGMLXNGKMV 803
+ + ++ K + +GK V
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTV 93
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
+ ++VG L S+ T+ ++ E +S G + I V RD T+RS G+ +V F T+ + A+
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 504 DTMNFDIIKGRPI--RIMWSQRDPSLRKSGVG--NVFIKNLDKSIDNKALFDTFSAFGNI 671
II G+ + + + D + +S V +++ + + L + F+ +G +
Sbjct: 82 -KQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 140
Query: 672 LSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGMLXNG 794
++ D+ T +G+GFV F+ ++ + + + M+ NG
Sbjct: 141 TKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV-NG 181
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 564 DPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFET 740
D SL + +F+ L + + + + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 741 EXXANKSIEKVNGMLXNGKMV 803
+ + ++ K + +GK V
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTV 93
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Frame = +3
Query: 576 RKSGVGN------VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHF 734
+ SGVGN VF+ N+ + + FS GN+LS K+ D ETG KGYGF+ F
Sbjct: 7 KSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Query: 735 ETEXXANKSIEKVNGMLXNGKMVYV 809
A +I +NG +G+++ V
Sbjct: 67 PDIQTAEVAIRNLNGYELSGRILRV 91
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S++VG++ D++E + FS AG VLSI++ D T + GY ++ F AE A+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 510 MNFDIIKGRPIRI 548
+N + GR +R+
Sbjct: 79 LNGYELSGRILRV 91
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = +3
Query: 297 MNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 476
MN P +LYVG D+TE +L F G V++I + D + + G+ +V F
Sbjct: 1 MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Query: 477 QPTDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKS 584
DA A+D MN + G+ IR+ +++ + +S
Sbjct: 61 MAEDAAMAIDNMNESELFGKTIRVNFARPPKATERS 96
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEKV 773
+++ + + K L F FG++++ + D E+G +G+GFV F+ A +I+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 774 NGMLXNGKMVYV 809
N GK + V
Sbjct: 73 NESELFGKTIRV 84
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
S+YVG+ TE L FS+ G + ++R+ D T R G+A++ F + A+RA++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 510 MNFDIIKGRPIRI 548
MN GRP+R+
Sbjct: 66 MNGAEFNGRPLRV 78
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 582 SGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANK 758
SG+ +V++ N + L + FS+ G I + ++ D ETG +G+ F+ F E A +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 759 SIEKVNGMLXNGKMVYV 809
++E++NG NG+ + V
Sbjct: 62 AVEQMNGAEFNGRPLRV 78
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L +TF+ FG ILS KV D+ T SK +GFV +E A +I
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 396 MNGFQIGSKRLKV 408
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
+ SL + +L T L F G + + + RD +R+S G+ +V F + DAE AL
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 504 DTMNFDIIKGRPIRIMWSQRD-PSLRKSGVG 593
D + ++ GR +R+ ++ D PS + G G
Sbjct: 78 DRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 582 SGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANK 758
+G+ ++ I NL L TF +G+I + +D+ + SKG+GFV F A
Sbjct: 16 NGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEH 75
Query: 759 SIEKVNGMLXNGKMVYV 809
++++ +G L +G+ + V
Sbjct: 76 ALDRTDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 324 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 503
+ SL + +L T L F G + + + RD +R+S G+ +V F + DAE AL
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 504 DTMNFDIIKGRPIRIMWSQRD-PSLRKSGVG 593
D + ++ GR +R+ ++ D PS + G G
Sbjct: 78 DRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 582 SGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANK 758
+G+ ++ I NL L TF +G+I + +D+ + SKG+GFV F A
Sbjct: 16 NGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEH 75
Query: 759 SIEKVNGMLXNGKMVYV 809
++++ +G L +G+ + V
Sbjct: 76 ALDRTDGKLVDGRELRV 92
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L++GD+ +D TE L + F+ G +V R + GY ++ F +A + L
Sbjct: 69 TLWIGDVPTDWTEETLSQVFTECGHA-PYKVKRVYVKDELKGYCFIEFITFDEARQTLYD 127
Query: 510 MNFDIIKG-RPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKV 686
+N + I G + IR + S + N+ + ++ + + L+ F + + K+
Sbjct: 128 LNGNRIPGFKDIRFNLCFANDSYNPNSEFNLHVSSVPDDMADAELYRIFDKYQSCRGAKM 187
Query: 687 XQDETGASKGYGFVHF 734
+ G+SKG GFV F
Sbjct: 188 FRFVDGSSKGSGFVRF 203
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 48.8 bits (111), Expect = 5e-06
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFST-AGPV-LSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
LYVG ++++ + + A P +SI + + +R+ G+A+V + +A L
Sbjct: 11 LYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENG-SRKHRGFAFVQCRSLAEANVLLA 69
Query: 507 TMNFDIIKGRPIRIMWSQRDPSLRK---SGVGNVFIKNLDKSIDNKALFDTFSAFGN-IL 674
+ G ++ +++++P + S + NVF++ + + + + L+ F + ++
Sbjct: 70 KFS-----GLFTKVNFAKKEPKPAENVMSNISNVFVRGISRDMPDTELYQAFGGITDGVV 124
Query: 675 SCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
C V + GYGFV F+T A K I +++G NGK++ V
Sbjct: 125 QCHV-------ADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISV 162
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +3
Query: 282 LNSIKMNPGPPSYPMASL---YVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSL 452
+N K P P M+++ +V + D+ + L++ F G + C +
Sbjct: 78 VNFAKKEPKPAENVMSNISNVFVRGISRDMPDTELYQAFG--GITDGVVQCHV-----AD 130
Query: 453 GYAYVNFQQPTDAERALDTMNFDIIKGRPIRIMWSQRDPSLRK 581
GY +V F +A++ + M+ + G+ I + W++ D RK
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRK 173
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.4 bits (110), Expect = 6e-06
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
P + +++V +L TE + + + R + R G+AYV +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHR--GFAYVVMENDQK 644
Query: 489 AERALDTMNFDIIKGRPIRIMWSQRDPSLRKS-------GVGNVFIKNLDKSIDNKALFD 647
A++AL + KGRP+ I S DP R VF++N+ + L
Sbjct: 645 AQQALLKDRVPV-KGRPMFI--SANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKA 701
Query: 648 TFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSI 764
FS FG + S + + G KG FV F+TE A K +
Sbjct: 702 LFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCV 740
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTA-GPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
+++VG+L +ITE L FS GPV ++R+ RD T + G+A+VNF+Q + AL
Sbjct: 247 AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALS 306
Query: 507 TMNFDIIKGRPIRI 548
+ K R +RI
Sbjct: 307 METIKMEK-RDLRI 319
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSA-FGNILSCKVXQD-ETGASKGYGFVHFETE 743
+F+ NL I AL FSA G + + ++ +D +TG KG+ FV+F+ +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQD 298
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
+V++ N+ + + + F+A G++ + ++ D ETG +G+ FV F E A +++E+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 771 VNGMLXNGKMVYV 809
+NG+ NG+ + V
Sbjct: 67 LNGVAFNGRNLRV 79
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VG + ++ L F+ G V +V D RS G+A+V F + AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQ 692
IKG+ + + P+ + VF+ L + L F FG + +
Sbjct: 91 E-QTIKGKSVEV-----KPAKSREN-KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPF 143
Query: 693 D-ETGASKGYGFVHFETEXXANKS 761
D +T A + + F+ FE E A+K+
Sbjct: 144 DKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VG + ++ L F+ G V +V D RS G+A+V F + AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 513 NFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQ 692
IKG+ + + P+ + VF+ L + L F FG + +
Sbjct: 91 E-QTIKGKSVEV-----KPAKSREN-KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPF 143
Query: 693 D-ETGASKGYGFVHFETEXXANKS 761
D +T A + + F+ FE E A+K+
Sbjct: 144 DKQTKARRNFAFIVFEEEESADKA 167
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++ GDL +++++ +L + F +V R+ T +S GY +V+F+ D RA+ M
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 513 NFDIIKGRPIRI---MWSQRD 566
+ + RPI++ W +R+
Sbjct: 265 DGKYVGNRPIKLRKSAWKERN 285
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 564 DPSLRKSGVGN--VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHF 734
DPSL + + VF +L + ++ L F + + KV ++ T SKGYGFV F
Sbjct: 192 DPSLAEWDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
Query: 735 ETEXXANKSIEKVNG 779
+++ +++G
Sbjct: 252 RDSEDYVRAMREMDG 266
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++V ++H + TE + +KFS G + +I + D T GYA V ++ +A A+D
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 513 NFDIIKGRPIRIMW 554
N + G+ +++ W
Sbjct: 117 NDTDLLGQNVKVDW 130
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKV 773
VF+ N+ + + D FS +G I + + D TG KGY V +ET+ AN++I++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 774 NGMLXNGKMVYV 809
N G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
+V++ N L + FS GN+ + ++ D ETG +G+ FV F E A +++++
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 771 VNGMLXNGKMVYV 809
NG+ NG+ + V
Sbjct: 65 FNGVDFNGRALRV 77
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 558 QRDPSLRK-SGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE--TGASKGYGFV 728
+R P+ R S V IKNL +++ L + FS +G I + + D +GYG+V
Sbjct: 121 RRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYV 180
Query: 729 HFETEXXANKSIEKVNGMLXNGKMVYV 809
++ A KSI+ ++G +G V+V
Sbjct: 181 EYDNLEDAEKSIKHMDGGQIDGMAVHV 207
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 321 PMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRR-SLGYAYVNFQQPTDAER 497
P + + +L ++ + L E FS G + ++ + D GY YV + DAE+
Sbjct: 131 PAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEK 190
Query: 498 ALDTMNFDIIKGRPIRI 548
++ M+ I G + +
Sbjct: 191 SIKHMDGGQIDGMAVHV 207
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 45 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 102
Query: 489 AERALD 506
AE A++
Sbjct: 103 AESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 65 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 122
Query: 489 AERALD 506
AE A++
Sbjct: 123 AESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
PP + L++G L D T+ L FS GPV+ V RD T+ S G+ +V F
Sbjct: 66 PPQ--LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFS 123
Query: 489 AERALD 506
AE A++
Sbjct: 124 AESAMN 129
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 42.3 bits (95), Expect = 4e-04
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMA-SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYA 461
+S N P P A L+VG + ++ E L F G + + +D T G A
Sbjct: 14 SSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCA 73
Query: 462 YVNFQQPTDAERALDTMNFD-IIKG--RPIRIMWSQRD--PSLRKSGVGN--VFIKNLDK 620
++ + A R T++ + G R +++ + D P+ K + + +FI L K
Sbjct: 74 FLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSK 133
Query: 621 SIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNG 779
+ F+ FG + V + GASKG FV ++ A+ +I ++G
Sbjct: 134 QQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHG 186
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L F+ FG+I+S KV D T SK +GFV ++ + +I
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 490 MNGFQIGMKRLKV 502
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 42.3 bits (95), Expect = 4e-04
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Frame = +3
Query: 285 NSIKMNPGPPSYPMA-SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYA 461
+S N P P A L+VG + ++ E L F G + + +D T G A
Sbjct: 14 SSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCA 73
Query: 462 YVNFQQPTDAERALDTMNFD-IIKG--RPIRIMWSQRD--PSLRKSGVGN--VFIKNLDK 620
++ + A R T++ + G R +++ + D P+ K + + +FI L K
Sbjct: 74 FLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSK 133
Query: 621 SIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNG 779
+ F+ FG + V + GASKG FV ++ A+ +I ++G
Sbjct: 134 QQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHG 186
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK 770
N+FI +L + + L F+ FG+I+S KV D T SK +GFV ++ + +I
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 771 VNGMLXNGKMVYV 809
+NG K + V
Sbjct: 490 MNGFQIGMKRLKV 502
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNI-LSCKVXQDETGASKGYGFVHFETEXXANKSIEKV 773
VF++NL + + + S FG I L+ ++G SKG FVHF T A+ IE V
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 774 -NGMLXNGKMV 803
+G++ + ++V
Sbjct: 325 EDGVIIDNRLV 335
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +3
Query: 339 VGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNF 518
V +L ++ E L + F G V+ I + RD +T G+A+V F+ DA RA+ +N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 519 DIIKGRPIRIMWSQ 560
+ +++ W++
Sbjct: 240 IRMYHMVLKVEWTR 253
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 603 IKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVN 776
+ NL + ++ L D F G ++ + +D+ TG KG+ FV FE+ A ++I ++N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
A +Y+G L ++E + FS G V++I + RD T +S G+A++ ++ A+D
Sbjct: 38 AWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVD 97
Query: 507 TMNFDIIKGRPIRI 548
N + R IR+
Sbjct: 98 NFNGISLHKRMIRV 111
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/72 (22%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEKV 773
++I L ++ + FS +G +++ + +D +TG SKG+ F+ ++ + +++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 774 NGMLXNGKMVYV 809
NG+ + +M+ V
Sbjct: 100 NGISLHKRMIRV 111
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/82 (21%), Positives = 37/82 (45%)
Frame = +3
Query: 564 DPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETE 743
+P + +F+ ++ L F A+G I + DE G +GY F+ + +
Sbjct: 95 NPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDK 154
Query: 744 XXANKSIEKVNGMLXNGKMVYV 809
+ + +K +G+ +GK + V
Sbjct: 155 AEMHTAYKKADGIKVDGKRLVV 176
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
L+V ++ E L F GPV+ + + + R S G+ +V Q P DA+RA
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEF 159
Query: 513 NFDIIKGRPIRI 548
N I+GR + +
Sbjct: 160 NGTTIEGRRVEV 171
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +3
Query: 585 GVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSI 764
G + + N+ L F G ++ ++ +E G SKG+GFV + A+++
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRAR 156
Query: 765 EKVNGMLXNGKMVYV 809
+ NG G+ V V
Sbjct: 157 AEFNGTTIEGRRVEV 171
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKV 773
V IK + K L F FGN+L +V ++ TG KG+ +V F+ + A + E +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
Query: 774 NGML 785
NG L
Sbjct: 94 NGYL 97
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +3
Query: 366 EAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMN 515
E L F G VL IRV R+ T G+AYV F AE A ++MN
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMN 94
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
L+V ++ E L F GPV+ + + + R S G+ +V Q P DA+RA
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEF 159
Query: 513 NFDIIKGRPIRI 548
N I+GR + +
Sbjct: 160 NGTTIEGRRVEV 171
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +3
Query: 585 GVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSI 764
G + + N+ L F G ++ ++ +E G SKG+GFV + A+++
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRAR 156
Query: 765 EKVNGMLXNGKMVYV 809
+ NG G+ V V
Sbjct: 157 AEFNGTTIEGRRVEV 171
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 591 GNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIE 767
G +F++NL + L F +G + +V D+ TGA KG+ V F A +
Sbjct: 279 GRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYS 338
Query: 768 KVNGMLXNGKMVYV 809
++G + G+M+++
Sbjct: 339 ALDGYVFKGRMMHI 352
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 375 LFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGRPIRIM 551
LF+K+ G V ++V D T G+A V F P A A ++ + KGR + I+
Sbjct: 298 LFKKY---GEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHIL 353
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 291 IKMNPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVN 470
IK P PP ++YV + ++ E +L E F AGPV+ + + RD + + +A V
Sbjct: 3 IKPTPSPPEE--RTIYVANFSEEVDEELLEELFIQAGPVVKV-ILRD-VRDSNAKFALVE 58
Query: 471 FQQPTDAERALDTMN 515
F+ A++ MN
Sbjct: 59 FEDELSVLFAIELMN 73
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 609 NLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEKVNGML 785
NL K L D F FG I C + D +G S+G+GF++F A + +K+
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 786 XNGKMVYV 809
+G + V
Sbjct: 142 LDGHKIRV 149
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 555 SQRDPSLRKS--GVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFV 728
+Q DPS G + + N+ + L F FG + ++ +E G SKG+GFV
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFV 197
Query: 729 HFETEXXANKSIEKVNGMLXNGKMVYV 809
E A ++ ++++G + G+ + V
Sbjct: 198 TMERPQDAERARQELHGSMIEGRKIEV 224
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 375 LFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGRPIRI 548
+FEKF G V + + + R S G+ +V ++P DAERA ++ +I+GR I +
Sbjct: 172 MFEKF---GVVSDVEIIFN--ERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE---R 497
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE R
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 498 ALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 641
ALD ++ R +R R G G D+ ++N +
Sbjct: 58 ALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDRLVENNLI 105
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 555 SQRDPSLRKS--GVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFV 728
+Q DPS G + + N+ + L F FG + ++ +E G SKG+GFV
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFV 197
Query: 729 HFETEXXANKSIEKVNGMLXNGKMVYV 809
E A ++ ++++G + G+ + V
Sbjct: 198 TMERPQDAERARQELHGSMIEGRKIEV 224
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 375 LFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGRPIRI 548
+FEKF G V + + + R S G+ +V ++P DAERA ++ +I+GR I +
Sbjct: 172 MFEKF---GVVSDVEIIFN--ERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 339 VGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNF 518
V +LH I E M+ + F + G + I + D R + G+A + F+ DA+++ + +N
Sbjct: 131 VENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNN 189
Query: 519 DIIKGRPIRIMWSQRD--PSLRK 581
+ GR IR+ Q P+++K
Sbjct: 190 FELAGRCIRLSIKQESQAPAVKK 212
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 339 VGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNF 518
V +LH I E M+ + F + G + I + D R + G+A + F+ DA+++ + +N
Sbjct: 276 VENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNN 334
Query: 519 DIIKGRPIRIMWSQRD--PSLRK 581
+ GR IR+ Q P+++K
Sbjct: 335 FELAGRCIRLSIKQESQAPAVKK 357
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
++VG L ++ L E F G + V D T++S GY +V + AERA
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 513 NFDIIKGRPIRI 548
N II GR +
Sbjct: 97 N-PIIDGRKANV 107
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFETEXXANKSIEK- 770
+F+ L +K L + F FG+I V D T S+GYGFV + A ++ +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 771 ---VNGMLXNGKMVYVG 812
++G N + Y+G
Sbjct: 97 NPIIDGRKANVNLAYLG 113
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEKV 773
+F+ L+ ++ L FS FG I +C++ +D +G S Y F+ F+ ++ K+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 774 NGMLXNGKMVYV 809
+ +L + + ++V
Sbjct: 303 DNVLIDDRRIHV 314
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEKV 773
+F+ L+ ++ L FS FG I +C++ +D +G S Y F+ F+ ++ K+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 774 NGMLXNGKMVYV 809
+ +L + + ++V
Sbjct: 303 DNVLIDDRRIHV 314
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEKV 773
+F+ L+ ++ L FS FG I +C++ +D +G S Y F+ F+ ++ K+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 774 NGMLXNGKMVYV 809
+ +L + + ++V
Sbjct: 234 DNVLIDDRRIHV 245
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 387 FSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGRPIRI 548
F GPV+ + + + R S G+ +V Q P DA+RA N I+GR + +
Sbjct: 2 FEKVGPVVDVEIIFN--ERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 53
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 651 FSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNGMLXNGKMVYV 809
F G ++ ++ +E G SKG+GFV + A+++ + NG G+ V V
Sbjct: 2 FEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 53
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 507 TMNFDIIKGRPIRI 548
++ I G R+
Sbjct: 58 ALDGSRICGVRARV 71
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = +3
Query: 327 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 506
A +YVG L SD T L E F G R+ + + RR G+A+V + DAE A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFG-----RIRKVWVARRPPGFAFVEYDDVRDAEDAVR 57
Query: 507 TMNFDIIKGRPIRI 548
++ I G R+
Sbjct: 58 ALDGSRICGVRARV 71
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANK 758
+F+ S L + F F + K+ + G SKGYGF+ FETE A +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANK 758
+F+ S L + F F + K+ + G SKGYGF+ FETE A +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.034
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 555 SQRDPSLRKSGVGNVFIKNLDKSIDNKA-LFDTFSAFGNILSCKVXQDETGASKGYGFVH 731
S +DP + ++ VFI N+ ++I + + + F FG I++ A +G+GFV
Sbjct: 74 SSKDPHMIRA---RVFIGNIARAIITRDDIIELFRPFGKIIAVNYF-----AQQGFGFVQ 125
Query: 732 FETEXXANKSIEKVNGM 782
F A++S +NGM
Sbjct: 126 FNEAGSADESCRSLNGM 142
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 594 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYG 722
N+FI +L + + L +TF+ FG ILS KV D+ T SK +G
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 777 GMLXNGKMVYV 809
GM K + V
Sbjct: 353 GMQLGDKQLVV 363
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
+++G L + +TE + E + GP+ + + D S GYA+ + PT ++A+ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDS-QGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 513 N 515
N
Sbjct: 352 N 352
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +3
Query: 357 DITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGR 536
D E + E G V I VC + I +G YV F + DAE+A + +N G+
Sbjct: 89 DFYEEVFVEMERKYGEVEEINVCEN-IGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQ 147
Query: 537 PI 542
PI
Sbjct: 148 PI 149
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 777 GMLXNGKMVYV 809
GM K + V
Sbjct: 353 GMQLGDKQLVV 363
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
+++G L + +TE + E + GP+ + + D S GYA+ + PT ++A+ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDS-QGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 513 N 515
N
Sbjct: 352 N 352
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 777 GMLXNGKMVYV 809
GM K + V
Sbjct: 328 GMQLGDKQLVV 338
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
+++G L + +TE + E + GP+ + + D S GYA+ + PT ++A+ +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDS-QGNSKGYAFAEYLDPTLTDQAIAGL 326
Query: 513 N 515
N
Sbjct: 327 N 327
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 597 VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 777 GMLXNGKMVYV 809
GM K + V
Sbjct: 331 GMQLGDKQLVV 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
+++G L + +TE + E + GP+ + + D S GYA+ + PT ++A+ +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDS-QGNSKGYAFAEYLDPTLTDQAIAGL 329
Query: 513 N 515
N
Sbjct: 330 N 330
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/117 (23%), Positives = 48/117 (41%)
Frame = +3
Query: 429 DMITRRSLGYAYVNFQQPTDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIK 608
D ++R G A P D +R T +D+ G + + R ++ +FI
Sbjct: 138 DYLSRTGGGGAGGRGPPPKDLDRPTRTGTYDLF-GLNMEFL---RQHNIEPPLCERIFIA 193
Query: 609 NLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVNG 779
NL ++ L++ F G I D+ G SKG + + A +++ +NG
Sbjct: 194 NLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLNG 250
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.18
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L+VG++ SD+ E + F G V + + + T YA+V FQ A +A
Sbjct: 170 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAE 227
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALFDTFSAFGNILSCKV 686
+ RPIR S+ KS V +F+ L D + L F FG + + +
Sbjct: 228 E-----QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVEN--I 280
Query: 687 XQDETGASKGYGFVHFETEXXANKSIEKVNG 779
D + Y +V +E + ++ + G
Sbjct: 281 DYDH---GQPYAYVVYENTHTSQEACRSLRG 308
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.18
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L+VG++ SD+ E + F G V + + + T YA+V FQ A +A
Sbjct: 170 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAE 227
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALFDTFSAFGNILSCKV 686
+ RPIR S+ KS V +F+ L D + L F FG + + +
Sbjct: 228 E-----QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVEN--I 280
Query: 687 XQDETGASKGYGFVHFETEXXANKSIEKVNG 779
D + Y +V +E + ++ + G
Sbjct: 281 DYDH---GQPYAYVVYENTHTSQEACRSLRG 308
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.5 bits (73), Expect = 0.18
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 509
+L+VG++ SD+ E + F G V + + + T YA+V FQ A +A
Sbjct: 147 TLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAE 204
Query: 510 MNFDIIKGRPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALFDTFSAFGNILSCKV 686
+ RPIR S+ KS V +F+ L D + L F FG + + +
Sbjct: 205 E-----QDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVEN--I 257
Query: 687 XQDETGASKGYGFVHFETEXXANKSIEKVNG 779
D + Y +V +E + ++ + G
Sbjct: 258 DYDH---GQPYAYVVYENTHTSQEACRSLRG 285
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVC---RDMITRRSLGYAYVNFQQPTDAERA 500
++YV ++ +TE L F + GP+ ++++ + RR A+V F D +R
Sbjct: 201 NVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRF 260
Query: 501 LDTMNFDIIKGRPIRIMWSQ 560
+ + I++ PIR +++
Sbjct: 261 MAEVRVIIVRNEPIRFAFAR 280
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE---RAL 503
+YVG+L D+ E + + F G + + D+ + R +A+V F+ DAE RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 504 DTMNFDIIKGRPIRIMWSQ 560
D FD GR IR+ +++
Sbjct: 67 DGYEFD---GRRIRVEFTR 82
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAE---RAL 503
+YVG+L D+ E + + F G + + D+ + R +A+V F+ DAE RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 504 DTMNFDIIKGRPIRIMWSQ 560
D FD GR IR+ +++
Sbjct: 67 DGYEFD---GRRIRVEFTR 82
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 576 RKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXAN 755
R S ++ + +D ++ F G ++ C++ + G SKG+GFV + N
Sbjct: 168 RDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQN 227
Query: 756 K 758
K
Sbjct: 228 K 228
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 651 FSAFGNILSCKVXQD-ETGASKGYGFVHFETEXXANKSIEK 770
F +G+I S + D +TG +G+ + F+++ ANK+IE+
Sbjct: 45 FKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQ 85
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 570 SLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHF 734
S +K VF+ N+ ++ + + GN+ S K + G +G+GF HF
Sbjct: 40 SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHF 94
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 570 SLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHF 734
S +K VF+ N+ ++ + + GN+ S K + G +G+GF HF
Sbjct: 40 SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHF 94
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
P S+ +YV ++ E L F G VLS+ + + R S G+ +V
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIES 102
Query: 489 AERALDTMNFDIIKGRPIRIMWSQRDPSLRK 581
E+A ++ ++GR I + + P+ RK
Sbjct: 103 CEKARAALHESHVQGRIIEV--RRATPTRRK 131
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 582 SGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKS 761
S V ++I+N+ +++ + L + F + ++ D K Y F+HF K+
Sbjct: 374 SKVKVLYIRNIKEAVTEEKLNELFKEYASL-------DRVKKVKDYAFIHFNERDDCLKA 426
Query: 762 IEKVNGMLXNGKMV 803
+E+ NG G +V
Sbjct: 427 MEEWNGKELEGTVV 440
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 567 PSLRKSGVGN-VFIKNLDKSIDNKALFDTFSAFGNILSCKVXQDE-TGASKGYGFVHFET 740
P+ +G G+ +++ ++ + L F G I ++ D +GAS+GY FV +
Sbjct: 191 PATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCN 250
Query: 741 EXXANKSIEKVNG 779
+ A + + +G
Sbjct: 251 KEDAAAAAKTYDG 263
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +3
Query: 309 PPSYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTD 488
P S+ +YV ++ E L F G VLS+ + + R S G+ +V
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIES 102
Query: 489 AERALDTMNFDIIKGRPIRIMWSQRDPSLRK 581
E+A ++ ++GR I + + P+ RK
Sbjct: 103 CEKARAALHESHVQGRIIEV--RRATPTRRK 131
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 333 LYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDTM 512
LY+ +L IT ++E F G V IRV TR G A+V ++ DA+ A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETR---GTAFVVYEDIFDAKTACEHL 77
Query: 513 NFDIIKGRPIRIMWSQ 560
+ + R + +++ Q
Sbjct: 78 SGYNVSNRYLVVLYYQ 93
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 307 VHQVIRWHLCMLEIYTLI*PRPCCLKNFRLLG 402
V + +RWHL + TL+ CLKNF + G
Sbjct: 153 VQEELRWHLLFSPVTTLLDIFTRCLKNFEITG 184
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 603 IKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
I+N+ K+ ++ LF F FG + C+V GFV+ + A++ + +N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLN 74
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 603 IKNLDKSIDNKALFDTFSAFGNILSCKVXQDETGASKGYGFVHFETEXXANKSIEKVN 776
I+N+ K+ ++ LF F FG + C+V GFV+ + A++ + +N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLN 74
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 684 VXQDETGASKGYGFVHFETEXXANKSIEKVNG 779
V ++G+ KG+ +V FE E N +I +NG
Sbjct: 44 VHDRDSGSFKGFAYVTFENEQQMNTAISGLNG 75
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 300 NPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPV 407
+P P+ P ++V +LH +TEA L E S GPV
Sbjct: 24 DPTNPN-PSIVVHVRNLHQKVTEADLLEALSNFGPV 58
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 300 NPGPPSYPMASLYVGDLHSDITEAMLFEKFSTAGPV 407
+P P+ P ++V +LH +TEA L E S GPV
Sbjct: 24 DPTNPN-PSIVVHVRNLHQKVTEADLLEALSNFGPV 58
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 330 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 476
+LYVG+L S +TE + F+ G V +V D LGY N Q
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD-----ELGYLATNAQ 90
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical
protein F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 424 QTRIDRTGPAVENFSNNMASVISECKSPTYRD 329
Q+RI + SN M+SVI +SPT+RD
Sbjct: 845 QSRIVMADDDDSSESNPMSSVIDRSRSPTFRD 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,455,256
Number of Sequences: 27780
Number of extensions: 346063
Number of successful extensions: 934
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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