Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H07
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 131 2e-30
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 130 4e-30
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 130 4e-30
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 130 4e-30
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 130 4e-30
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 122 1e-27
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 105 1e-22
AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1 p... 40 0.007
AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1 p... 40 0.007
AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1 p... 40 0.007
AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1 p... 40 0.007
BC071603-1|AAH71603.1| 691|Homo sapiens zinc finger protein 770... 30 7.6
AK000589-1|BAA91274.1| 186|Homo sapiens protein ( Homo sapiens ... 30 7.6
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 131 bits (317), Expect = 2e-30
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 96 QAFFLVADDIMDSSLTRRGQTCWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 154
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 155 NLIELFLQSSYQTEIGQTLDLLT 177
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 130 bits (315), Expect = 4e-30
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 29 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 88
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 89 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 147
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 148 NLIELFLQSSYQTEIGQTLDLLT 170
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 130 bits (315), Expect = 4e-30
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 103 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 162
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 163 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 221
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 222 NLIELFLQSSYQTEIGQTLDLLT 244
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 130 bits (315), Expect = 4e-30
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 102 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 161
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 162 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 220
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 221 NLIELFLQSSYQTEIGQTLDLLT 243
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 130 bits (315), Expect = 4e-30
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 102 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 161
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 162 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 220
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 221 NLIELFLQSSYQTEIGQTLDLLT 243
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 122 bits (295), Expect = 1e-27
Identities = 57/143 (39%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+IGD LK++L YN +GGK+ R +T ++++ + P K +L+ A +GWCVE+
Sbjct: 31 PEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELL 90
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S RRG CWY++P VG+ A +D+ L+ + ++ LK R P Y+
Sbjct: 91 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AIDDANLLEACIYPLLKLYCREQPYYL 149
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF ++ + T +GQ L +T
Sbjct: 150 NLIELFLQSSYQTEIGQTLDLLT 172
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 105 bits (253), Expect = 1e-22
Identities = 49/143 (34%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Frame = +3
Query: 312 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 482
P+ GD LK++L YN +GGK+ RG+ +++++ + +P K+ +L+ A +GW ++
Sbjct: 4 PETGDATARLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQLL 63
Query: 483 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 662
QA+ +V DDIMD S +G WY++ +G+ A ND++L+ + ++ LK R P Y+
Sbjct: 64 QAFFLVADDIMDSSLTCQGQISWYQKLGMGLD-AINDAILLEACIYCLLKLYCREQPYYL 122
Query: 663 KMFELFNETLWSTSMGQHLXHVT 731
+ ELF + + T +GQ L +T
Sbjct: 123 NLMELFQQNSYQTEIGQTLDLIT 145
>AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 40.3 bits (90), Expect = 0.007
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 168 ADERYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKK 338
+D +Y+N A + A KN E +E L ++ LQN +K VP+ IG L +
Sbjct: 10 SDSKYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQ 69
Query: 339 MLHYNLVGGKHTRGITTV-ISYKTI 410
LH L GG H + + T I +K I
Sbjct: 70 CLHPALPGGVHRKALETYEIIFKII 94
>AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 40.3 bits (90), Expect = 0.007
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 168 ADERYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKK 338
+D +Y+N A + A KN E +E L ++ LQN +K VP+ IG L +
Sbjct: 10 SDSKYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQ 69
Query: 339 MLHYNLVGGKHTRGITTV-ISYKTI 410
LH L GG H + + T I +K I
Sbjct: 70 CLHPALPGGVHRKALETYEIIFKII 94
>AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 40.3 bits (90), Expect = 0.007
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 168 ADERYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKK 338
+D +Y+N A + A KN E +E L ++ LQN +K VP+ IG L +
Sbjct: 10 SDSKYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQ 69
Query: 339 MLHYNLVGGKHTRGITTV-ISYKTI 410
LH L GG H + + T I +K I
Sbjct: 70 CLHPALPGGVHRKALETYEIIFKII 94
>AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 40.3 bits (90), Expect = 0.007
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 168 ADERYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKK 338
+D +Y+N A + A KN E +E L ++ LQN +K VP+ IG L +
Sbjct: 10 SDSKYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQ 69
Query: 339 MLHYNLVGGKHTRGITTV-ISYKTI 410
LH L GG H + + T I +K I
Sbjct: 70 CLHPALPGGVHRKALETYEIIFKII 94
>BC071603-1|AAH71603.1| 691|Homo sapiens zinc finger protein 770
protein.
Length = 691
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 491 ICLKHFDTPSQLTSHF 444
IC KHF+TPS+L H+
Sbjct: 31 ICFKHFETPSKLARHY 46
>AK000589-1|BAA91274.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ20582 fis, clone KAT12156. ).
Length = 186
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 491 ICLKHFDTPSQLTSHF 444
IC KHF+TPS+L H+
Sbjct: 31 ICFKHFETPSKLARHY 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,910,876
Number of Sequences: 237096
Number of extensions: 2200004
Number of successful extensions: 4531
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4524
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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