Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H07
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.005
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.2
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 9.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.2
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.2
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.005
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 327 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 497
W+ +H + GITTV++ TI + ++ A L W + M YCI
Sbjct: 263 WVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCI 319
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 631 FRNSNKELCIKRESLKAHVMPTSG 560
FR+ +KELC + L + PT G
Sbjct: 485 FRDMHKELCDGKPGLCDAMKPTKG 508
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = -2
Query: 452 SHFQSMFGDFFRFFNCFV*NHSSYSSCMFTANQIVMKHLFQPIPYLGH 309
SHF +FG+ F F S+ ++ + V +++ P++ H
Sbjct: 116 SHFPYVFGEAFCIIQSFAAETSANATVLTITAFTVERYIAICHPFISH 163
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WDGVSKCFRHIAL 498
WDGV CF + +L
Sbjct: 366 WDGVCMCFIYASL 378
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WDGVSKCFRHIAL 498
WDGV CF + +L
Sbjct: 335 WDGVCMCFIYASL 347
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WDGVSKCFRHIAL 498
WDGV CF + +L
Sbjct: 386 WDGVCMCFIYASL 398
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WDGVSKCFRHIAL 498
WDGV CF + +L
Sbjct: 335 WDGVCMCFIYASL 347
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 327 WLKKMLHYNLVGGKHTRGITTVISYKTI 410
W+ +++ + GITTV++ TI
Sbjct: 260 WVSFWINHEATSARVALGITTVLTMTTI 287
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 615 LFEFLKTNFRTNPNYMKMFELFNETL 692
LF FL+T + P Y + E+L
Sbjct: 25 LFSFLRTRTKLQPTYFHHTYIIYESL 50
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 615 LFEFLKTNFRTNPNYMKMFELFNETL 692
LF FL+T + P Y + E+L
Sbjct: 25 LFSFLRTRTKLQPTYFHHTYIIYESL 50
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 481 NISTHHPSLQAIFKVCSVTFSGFS--IVLYEITVVIP 377
N++ HP + C+V SG S +Y ++ IP
Sbjct: 521 NLTKLHPPADLVVYACNVVGSGLSHGNWIYPASMTIP 557
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,193
Number of Sequences: 438
Number of extensions: 5092
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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