Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H06
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    30   0.082
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.8  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   3.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.2  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 3/150 (2%)
 Frame = +1

Query: 244 PMDTDEGPLINENSNGLSHLL-TEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLE 420
           P+  + GP  N    GL       GE    D  +  +  S     N V           E
Sbjct: 33  PLHANYGPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNHQQQPSPVNE 92

Query: 421 NNGP--RFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHA 594
             G     + ++ + G N     N   ++A   ++S+ + S S  A   T +  +     
Sbjct: 93  GTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTPTNPG--- 149

Query: 595 TDSNIGEINENSGNDSNFATEHINLNVDKS 684
            + N G  N N+ N S+    H++ N + +
Sbjct: 150 -NGNGGSNNNNNSNSSSSCNNHVSSNTNNN 178


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 18/76 (23%), Positives = 30/76 (39%)
 Frame = +1

Query: 322 NSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPNDSLNS 501
           NSV  AV    ++      +    AGS G+  ++ GP  S       +N       S ++
Sbjct: 487 NSVATAVAVGGSARSLDSLSSNTIAGSTGERFQDLGPAASESVRSQSNNTTVVSTPSSST 546

Query: 502 ALTEDNSIQSDSASHK 549
             +   +  S S+S K
Sbjct: 547 TSSSSTTSSSSSSSSK 562


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 559 DTDSRQSESQHATDSNIGEINEN 627
           D+DS  SES  ++D + G +  N
Sbjct: 45  DSDSSSSESSQSSDDDSGSVERN 67


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 461  PMSKESVLKRGPLFS 417
            P  KES+L+RG LFS
Sbjct: 1059 PGQKESLLQRGDLFS 1073


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 297 RKSVGVLIYQRTFVCIHGIFRSFL 226
           RK   V  Y   F+  HG FRS+L
Sbjct: 874 RKHGEVNFYMTQFLSDHGCFRSYL 897


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.130    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,803
Number of Sequences: 2352
Number of extensions: 12584
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)