Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H04
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    24   3.6  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    24   4.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   8.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   8.2  

>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +1

Query: 199 DTLKRTRIRRICASTAHSSVCHSLACGGRVSTCLMTCNHPPAFSFRSFSN 348
           + L    I+R  AST  +         G V TC     + PA+S    S+
Sbjct: 89  NALNTDAIKRSMASTLGADSNFGSLVNGAVDTCARQIQNDPAYSVAPISS 138


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 228 NMRIDCPQFGV-SFARLWRSCID 293
           N +      GV SF R WR+CID
Sbjct: 72  NKKFTIGTLGVGSFFRAWRNCID 94


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 258 HRTVGSRCAYSPYSCPFKCVK 196
           H  +G RC    ++C  +CV+
Sbjct: 347 HLDIGLRCVVCDFTCHQQCVR 367


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
 Frame = +1

Query: 232 CASTAH-----SSVCHSLACGGRVSTCLMTCNHPPAFS 330
           C S  H     SS     ACGG      M+C HP + S
Sbjct: 503 CGSEGHKARDCSSYVKCAACGGPHRIGHMSCEHPASRS 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,583
Number of Sequences: 2352
Number of extensions: 14106
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)