Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_H03
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 569 NYECSARNKQGWNLXFLHEIGLN 637
           N+     NKQGW     H + LN
Sbjct: 116 NFPYYRENKQGWQNSIRHNLSLN 138


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 65  LVDNRGHVHKTSVREILTWKPKYNFYEQSSENIWNRSLEVIKD 193
           L+ ++G     +   IL  K ++       EN+W + L V+KD
Sbjct: 181 LMVHQGETQFVAANVIL--KTRFKTINNILENLWAKKLIVVKD 221


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 155  QKIVHKSYIWVSKLKFL--APKFYVHVLCYPQVQHER 51
            +KIV    +++S L  +  A  FY+  +CY  +Q  R
Sbjct: 988  EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVR 1024


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 155 QKIVHKSYIWVSKLKFL--APKFYVHVLCYPQVQHER 51
           +KIV    +++S L  +  A  FY+  +CY  +Q  R
Sbjct: 269 EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVR 305


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 471 HFSDKLFFSHSNLGICISKLTFPPTY 394
           HF DK+F    N  + +     PP Y
Sbjct: 2   HFYDKMFNQEQNNNVPVVLDVIPPHY 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,516
Number of Sequences: 336
Number of extensions: 3758
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)