Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H02
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 34 0.14
07_01_0180 + 1266975-1267550 33 0.19
06_03_0840 + 25293314-25293838 32 0.57
05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386 32 0.57
10_08_0330 - 16816497-16819952 31 1.00
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 31 1.3
08_02_1501 + 27568934-27569287,27569372-27569458 31 1.3
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 30 1.7
12_01_0800 - 7331444-7331539,7331617-7331742,7331830-7331907,733... 30 2.3
09_06_0122 + 20990754-20991263,20992635-20992748 30 2.3
05_03_0478 - 14526180-14526578 30 2.3
01_06_1105 - 34559694-34559852,34560298-34560312,34560451-345605... 29 3.0
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 29 4.0
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 29 4.0
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901... 29 5.3
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 5.3
01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987 29 5.3
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732... 28 7.0
11_06_0463 + 23879587-23879771,23879783-23881658 28 7.0
11_01_0460 + 3561490-3564104,3564162-3564558 28 7.0
05_01_0299 - 2322204-2322734,2324089-2326164 28 7.0
03_02_0082 - 5515019-5515087,5515178-5515285,5516032-5516148,551... 28 7.0
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 28 7.0
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 24 8.8
12_02_0333 + 17660454-17660502,17660587-17660704,17661181-176612... 28 9.3
09_01_0019 + 403078-404211 28 9.3
05_05_0337 - 24176184-24176858 28 9.3
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 28 9.3
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 28 9.3
01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848 28 9.3
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 568 QRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRR 675
+R+ R P S+ DG RR R +E+++R R++RR
Sbjct: 135 RRRHRRRSPSSESSDGGRSRRHRRDESSRRQRDERR 170
>07_01_0180 + 1266975-1267550
Length = 191
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +1
Query: 607 DDGYWDRRRR------NNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXA 753
+DG +RRRR N E+A+RSR +RR LE+ EL E L ++L A
Sbjct: 68 EDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDA 122
>06_03_0840 + 25293314-25293838
Length = 174
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 598 SKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQL 747
+++D+ R N E+A+RSR +RR L V EL NH L +L
Sbjct: 65 TRRDERKERRLASNRESARRSRVRRRRQLDELSSHVAELRAANHRLAVEL 114
>05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386
Length = 323
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQ 744
R +N E+A RSR +++ LE +V+ L +EN LK Q
Sbjct: 265 RMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQ 304
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 31.1 bits (67), Expect = 1.00
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -2
Query: 197 GQDHSFKI*KCQISLPLFTSRKNINVNSLSQCCYDEISNANGVALFQLLGHVYTLRSL 24
G++ F+I I + L T +++ NSLSQC DE+ N G+ F L Y RS+
Sbjct: 938 GKEQIFEIKTYAIDIQLVTGI-SLSGNSLSQCIPDELMNLQGLQ-FLNLSRNYLSRSI 993
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 501 GRRGLVHREMRRDGETSARWWRSAGLHWGGP*GCTGP 391
G+ G V +DG R R G+ GGP G TGP
Sbjct: 122 GKAGCVGSRADQDGRLDGREVRDGGISSGGPRGNTGP 158
>08_02_1501 + 27568934-27569287,27569372-27569458
Length = 146
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXAIK 759
R +N E+A+RSR +++ LEQ V L EN L+ Q +K
Sbjct: 76 RAMKNRESAERSRARKQAYLQELEQEVRLLRAENAALRHQCHQLK 120
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 501 GRRGLVHREMRRDGETSARWWRSAGLHWGGP*GCTGP 391
G+ G V +DG R R G+ GGP G TGP
Sbjct: 217 GKGGCVGSRADQDGRIGGREVRDGGISSGGPKGNTGP 253
>12_01_0800 -
7331444-7331539,7331617-7331742,7331830-7331907,
7332515-7332747,7332832-7332871,7333016-7333070,
7333158-7333345,7333416-7333475,7333686-7333769,
7334817-7334903,7335178-7335246,7335354-7335410
Length = 390
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXAIK 759
R++ N E+A+RSR +++ L QR L +EN L+ ++ I+
Sbjct: 301 RKQSNRESARRSRLRKQAECEELAQRAEVLKQENTSLRDEVNRIR 345
>09_06_0122 + 20990754-20991263,20992635-20992748
Length = 207
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +1
Query: 622 DRRRR----NNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQ 744
DRR+R N E+A RSR +++ LE V +L +EN +L+ +
Sbjct: 123 DRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQENKMLRVK 167
>05_03_0478 - 14526180-14526578
Length = 132
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 571 RKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 672
R+QR D ++ DGY RRR E +R R +R
Sbjct: 57 RRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPRR 90
>01_06_1105 -
34559694-34559852,34560298-34560312,34560451-34560522,
34560695-34561549
Length = 366
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQ 744
R +N E+A RSR +++ LE +V L +EN LK Q
Sbjct: 269 RMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ 308
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 568 QRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKE 723
+R+Q + + W+RRR E A R + + D V E+RV+ S E
Sbjct: 90 ERRQSVAAERRRSQEEEWERRRSQEEEAVREMRRSQEEDEV-EERVIRESSE 140
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 495 RGLVHREMRRDGETSARWWRSAGLHWGGP*GCTGPCAQQ--LLLAQDELGNHVSADCDWS 322
R +V +E+RR ET WR L W P G G A LL A E G +
Sbjct: 679 RAVVRKEVRRHRETRRGRWRRLLLWW--PLGAHGALAGAGVLLDAAVEGGRETARQARAH 736
Query: 321 ARILTVV 301
AR+L V+
Sbjct: 737 ARLLVVL 743
>10_08_0132 +
15087274-15087797,15089544-15089732,15090048-15090186,
15090454-15090594,15091420-15091569,15091908-15092011,
15092258-15092432,15092714-15092823,15092906-15093073,
15093180-15093345,15093771-15094049,15094445-15094543,
15094619-15094676,15095145-15095336,15095693-15095724,
15096023-15096117,15096321-15096426
Length = 908
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +3
Query: 585 VHTGQQKGRRLLGPQEAQQRGSQAVSRKTPLQRHGPGTARRRTLEGKPRP 734
+H+G G L G + QQRG R L RH G ARRR G P
Sbjct: 273 LHSGVASGYSLQGGKPQQQRGE--FGRLRFLPRHA-GVARRRRRRGGRSP 319
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 541 DFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSK 720
D RK ++ QRE D K DRRR ++E + R+ +R D ++R E+S
Sbjct: 266 DEPRKSQKEKKGQREDSEDDKPKKSRKDRRRHDSEDEEPRRKHQRSEDDEPKRRQSEVSG 325
Query: 721 EN 726
++
Sbjct: 326 DD 327
>01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987
Length = 250
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKEN 726
R +N E+A RSRE+++ LE V +L +EN
Sbjct: 189 RMIKNRESAARSRERKQAYIAELESLVTQLEEEN 222
>12_02_0450 +
19172812-19172920,19173020-19173088,19173168-19173274,
19173874-19174365
Length = 258
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 499 SNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDD 612
S G +G S G F D FG RK E + D KDD
Sbjct: 211 SFGDAGGSTGGGDFSGAGGDSFGSRKNDELMDDLFKDD 248
>11_06_0463 + 23879587-23879771,23879783-23881658
Length = 686
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 363 PEPATAAERRGRCSPRARPS 422
PEP TAAE+ G SP PS
Sbjct: 305 PEPPTAAEKSGDASPSLSPS 324
>11_01_0460 + 3561490-3564104,3564162-3564558
Length = 1003
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -2
Query: 371 WLRMNSATMFRRTVTGPHESSLWLKIFAVFENSFAGIIQMAV-ELSKIH---KKKQKSQP 204
W ++ F+ + ++ LK+F + N+F G+I ++ +L+K++ +K +
Sbjct: 247 WFEVDYNNFFQGGIPSSLANASKLKVFDISRNNFTGVIPCSIGKLTKVYWLNLEKNQLHA 306
Query: 203 LNGQDHSF 180
N QD F
Sbjct: 307 RNKQDWEF 314
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/93 (23%), Positives = 37/93 (39%)
Frame = +1
Query: 457 LSVSPHFPMDQAPPSNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRR 636
LS+S P P+ S+ D++ G + + Q+ +IP KKD+ +R
Sbjct: 470 LSLSLPLPSSNDSPAPSSNHDANTEGMDSSSKINLSYDEDQKVWIPQDKKDEMVLILVQR 529
Query: 637 NNEAAKRSREKRRFNDMVLEQRVVELSKENHVL 735
E R+ + + Q L+KE L
Sbjct: 530 QKELQAHMRDWTDWAQQKVMQVTRRLAKEKEEL 562
>03_02_0082 -
5515019-5515087,5515178-5515285,5516032-5516148,
5516263-5516382,5518038-5518868
Length = 414
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 642 RGSQAVSRKTPLQRHGPGTARRRTLEGKPRPQSTIXRHK 758
R +A S +P R GP RR+++ P ++T +H+
Sbjct: 19 RAPRAASPSSPGGRRGPTPERRKSVSSVPEAENTRPQHR 57
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 508 SSGDSHDYGA-FDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRS 660
++GD+H G FD + ++F + ++++ D KD+ + RR E AKR+
Sbjct: 251 TNGDTHLGGEDFDQRIMEYFIKLIKKKYSKDISKDNRALGKLRREAERAKRA 302
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 23.8 bits (49), Expect(2) = 8.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 386 LSSCCWLRMNS 354
LS CCWLR+ S
Sbjct: 1003 LSFCCWLRVES 1013
Score = 22.2 bits (45), Expect(2) = 8.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 305 WLKIFAVFENSFAGIIQMAVELSK 234
WL++ + ENS G+ E K
Sbjct: 1008 WLRVESFLENSMMGLFSFFTESGK 1031
>12_02_0333 +
17660454-17660502,17660587-17660704,17661181-17661255,
17661341-17661412,17661606-17661643,17661758-17661791,
17662396-17662519,17663334-17663417,17663991-17664056,
17664110-17664316
Length = 288
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 492 GLVHREMRRDGETSARWWRSAGLHWGGP*GC 400
GL H +R S +W G +W P GC
Sbjct: 152 GLEHALGKRTTADSGEFWHVEGFYWRNPVGC 182
>09_01_0019 + 403078-404211
Length = 377
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 499 SNGSSGDSHDYGAFDFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 672
S+G SG A D KR R++R +S DG R+ + AKRS+EKR
Sbjct: 323 SDGDSGSGASDSADDRKRSS----RRRRHRKSESSGSDG----DERHGQGAKRSKEKR 372
>05_05_0337 - 24176184-24176858
Length = 224
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 595 DSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQL 747
D K+D R N EA ++ REK++ + LE+ V +L N L +L
Sbjct: 65 DIKEDLTKTRRPLGNREAVRKYREKKKAHAAFLEEEVKKLRAANQQLLKRL 115
>04_01_0422 +
5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 NGGRIVKNPQKKTKITTAQRSRSQFQNLKMSNFTPTFHVQKKYKCKFTVTMLL*RN-IQC 79
+GG+ PQ T S Q LK+SN T H + F +T L ++C
Sbjct: 310 HGGQSFGCPQNAGAAGTIYES--SLQTLKVSNGNYTTHTETPL-LGFPMTRLWSNVLVEC 366
Query: 78 EWRCVVPIAWTRLHFAQSGVRLIGR 4
+ +VP+ W+R+ +RL+ +
Sbjct: 367 NAKVLVPLLWSRVQ-VTGQIRLLSK 390
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 336 PPKHGCRVHPEPATAAERRGRCSPRARPSAD 428
PP G V P PAT A + G C P A D
Sbjct: 63 PPPVGLPVPPLPATMAPQPGYCVPAAATVVD 93
>01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848
Length = 345
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 556 DFFGQRKQREFIPDSKK-DDGYWDRRRRNNEAAKRSREKR 672
D + ++ ++PDS+ G+W +RRNNE+++R+ R
Sbjct: 257 DSWDNHRENCYVPDSQGWSYGHW--KRRNNESSRRNSRGR 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,817,855
Number of Sequences: 37544
Number of extensions: 397161
Number of successful extensions: 1483
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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