Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_H02
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16) 66 4e-11
SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13) 56 3e-08
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_13456| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_19296| Best HMM Match : bZIP_2 (HMM E-Value=1.1e-08) 42 7e-04
SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06) 41 0.001
SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14) 40 0.002
SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09) 39 0.005
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 36 0.036
SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10) 36 0.047
SB_37384| Best HMM Match : bZIP_2 (HMM E-Value=8.5e-11) 30 1.8
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_11462| Best HMM Match : UBA (HMM E-Value=1.3) 30 2.3
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 29 3.1
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 5.4
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 28 7.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 28 7.2
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
Length = 298
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1
Query: 565 GQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQ 744
G++ +R+F+PD +KDD YW RR +NN AA+RSR+ RR ++ + + +L KEN L+ +
Sbjct: 154 GKKARRKFVPDQEKDDRYWARRVKNNVAARRSRDMRRQKEIEISMKWKQLEKENARLREE 213
Query: 745 LXAIK 759
L +K
Sbjct: 214 LQQLK 218
>SB_51988| Best HMM Match : bZIP_2 (HMM E-Value=7.3e-13)
Length = 244
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +1
Query: 571 RKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLX 750
++QR +P KD YW+RR NN AAKRSR+ +R +M + +R L EN L+ ++
Sbjct: 166 KRQRTSVPGEMKDQKYWERRFENNVAAKRSRDLKRPKEMTVAKRAQNLEIENEKLRNEVT 225
Query: 751 AIK 759
+K
Sbjct: 226 MLK 228
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 565 GQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKA 741
G+R ++ F ++ KD+ YW++R+RNN +AKRSR+ RR ++ + R L +ENH K+
Sbjct: 145 GKRTEKHF--NNNKDNKYWEKRQRNNASAKRSRDARRVRELECQIRAEFLEEENHKYKS 201
>SB_13456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Frame = +1
Query: 466 SPHFPMDQAPPS-NGSSGDSHDYGA-FDFKRKDFFGQRK-----QREFIPDSKKDDGYWD 624
SP ++ +P S N S DS D + + + +D K ++ + + KD+ YW
Sbjct: 199 SPKSLINLSPRSQNSQSNDSTDSTSPKESEAEDISSNAKTKLSMRKNTVSNKDKDESYWK 258
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLK 738
RR RNN++AK+SR+ +R + + R+ L +EN LK
Sbjct: 259 RRIRNNKSAKKSRDAKRAKEEFVAWRIRYLEEENVCLK 296
>SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 604 KDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXA 753
KD Y ++R +NN AAKRSRE +R ++ Q+ + L KEN L + A
Sbjct: 51 KDQKYIEKRMKNNLAAKRSREAKRQREIEAMQKTLTLEKENSDLNKEALA 100
>SB_19296| Best HMM Match : bZIP_2 (HMM E-Value=1.1e-08)
Length = 216
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 604 KDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQ 744
KD Y ++R +NN AAKRSRE +R ++ Q+ + L KEN L +
Sbjct: 170 KDQKYIEKRMKNNLAAKRSREAKRQREIEAMQKTLTLEKENSDLNKE 216
>SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)
Length = 222
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 622 DRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQL 747
++RR+NNEA+KR+REKRR + L + KEN L+ Q+
Sbjct: 159 EKRRKNNEASKRTREKRRNKEQELLKEKEIKEKENKALRTQV 200
>SB_38317| Best HMM Match : bZIP_2 (HMM E-Value=5.1e-14)
Length = 561
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 604 KDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXAIK 759
K + Y ++RR+NN +AKRSRE R+ ++ + L EN L+A +K
Sbjct: 287 KTEQYREKRRKNNASAKRSREARKMREIHAQTAAAYLQDENAQLRALCHVLK 338
>SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09)
Length = 241
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 595 DSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQL 747
DS K + ++R+RNN+A+K+ R+ R+ L + EL +EN+ LK Q+
Sbjct: 175 DSDKSE---EKRKRNNQASKKFRQARKGKQQALFAKESELERENYSLKVQV 222
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 601 KKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXAI 756
K + Y +R RNN A ++SR K + + + RV EL++EN L +++ I
Sbjct: 194 KHSEEYRQKRERNNVAVRKSRFKSKQKFIETQSRVEELTEENERLHSRIDII 245
>SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10)
Length = 496
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 625 RRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLXAIK 759
RR+RN +AA R REKRR L++ EL ++N ++ + ++
Sbjct: 293 RRQRNKQAASRCREKRRQRLEELQREATELEEQNAEVERDIATLR 337
>SB_37384| Best HMM Match : bZIP_2 (HMM E-Value=8.5e-11)
Length = 456
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 622 DRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQL 747
+RR +NN A++ +R RR + L ++ L K N LK Q+
Sbjct: 391 ERRIKNNIASRHTRAARRQREQELFEKEEYLKKNNEELKQQI 432
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 547 KRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKE 723
KR DF RK++ + S D R+RR + K RE R N L+ +L E
Sbjct: 1126 KRSDFKNWRKKKHWKKYSSDVDALM-RKRRRKQDKKYQRELERLNQWALQMNEKKLEHE 1183
>SB_11462| Best HMM Match : UBA (HMM E-Value=1.3)
Length = 462
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 377 CCWLRMNSATMFRRTVTGPHESSLWLKIFAVFENSFAGII 258
C W+ + F + +E SLW++ F V N+F I+
Sbjct: 80 CAWVLPRPQSWFDSALMNSYEDSLWMEKFHVSRNTFMYIL 119
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 541 DFKRKDFFGQRKQREFIPDSKKDDGYWDRRRRNNEAAKRSREKR 672
D +R ++ + ++R + D +DD Y+D RR + R R R
Sbjct: 439 DLERDSYYRESRRRSYFRD--RDDAYYDDRREDEPRRSRYRNFR 480
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 269 AGIIQMAVELSKI---HKKKQKSQPLNGQDHSFKI*KCQISLPLFTSRKNIN 123
+G+ Q + L +I K KQ SQP + + + FKI + +LP+ T + N
Sbjct: 2069 SGVSQYSATLRRITSRKKGKQTSQPTSPKKNPFKITRKPSTLPIKTDNRGAN 2120
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 217 KNHNRS-TVKITVSKFKNVKFHSHFSRPEKI*M*IHCHNVVMTKYP 83
+NH R TV +VS F K +++ P K M I C N + + P
Sbjct: 320 RNHPRQFTVSTSVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMP 365
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 609 RRLLGPQEAQQRGSQAVSRKTPLQRHGPGTARRRTLEGKPRPQST 743
+R P +QRG +A R TP+Q G+ R E ++T
Sbjct: 3169 KRSPSPAAGKQRGDEAKGRSTPVQTPRRGSQDNRPAENSQYTENT 3213
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 619 WDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKE 723
W RR+R E KR + KR E+R ++L ++
Sbjct: 314 WKRRKRKQEWLKRRKIKRTLEKQAAEKRRLQLHQQ 348
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 597 QQKGRRLLGPQEAQQRGSQAVSRKTPLQRHGPGTARRRTLEGKPRP 734
QQK + Q+ QQ+ Q ++TP R P R++ + + +P
Sbjct: 787 QQKQQEQQQQQQQQQQQQQQQQQQTPASREQPVALRKQPVASREQP 832
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,525,487
Number of Sequences: 59808
Number of extensions: 446887
Number of successful extensions: 1889
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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