Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_G21
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical pr... 33 0.19
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 32 0.44
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 31 1.4
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 31 1.4
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 31 1.4
U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical pr... 30 1.8
U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin p... 30 1.8
AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical ... 30 2.4
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 3.1
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 3.1
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical p... 29 4.1
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 29 4.1
U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL031630-7|CAA20982.1| 158|Caenorhabditis elegans Hypothetical ... 28 7.2
L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical
protein F47C12.2 protein.
Length = 391
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Frame = +3
Query: 399 TKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLT-VPARWEDKNLRNYLNK 575
T + CP +IR G CY + +W A+ C+ S L + E++ + + L+K
Sbjct: 42 TDVELTCPDDWIRHGTKCYLPFNIHQSWPFAMTTCQRYGSTLAKIQTGSENQFIASLLSK 101
Query: 576 --KSIKKYSRWIGGIYD--SGDKEWKWGGELRKMHYQSFSKMKKMSPQELQWHC-IAMIP 740
K + WIG + D+ + W Y F ++ P L C + +
Sbjct: 102 PGKPTEGKEYWIGLTVEVLDDDELYLWSDGTPTSRYVGF--WRQDQPNFLNGSCALGKVE 159
Query: 741 EMQYRWAPRLCIXPRHYICK 800
W C R ++C+
Sbjct: 160 RKDLEWRLDTCNLLRRFVCE 179
>Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical
protein F31D4.4 protein.
Length = 333
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 417 CPPSFIRLGH--SCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKK 590
C PS++ + H SC+ + A + +AL C +++L + E+ ++ +
Sbjct: 20 CAPSWLHIAHLDSCFLSAPQPAEFSEALEYCTQSNASLVIINSEEEASIVREFFARENPS 79
Query: 591 YSRWIGGIYDSGDKEWKW 644
+ WIG +++ +++W
Sbjct: 80 FFNWIGMRWNARAADFQW 97
>Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical
protein ZK858.3 protein.
Length = 225
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKN-LRNYLNKKSIKKY 593
CP ++R SCYF + KA C D+ + L V E+ + +R++ K +
Sbjct: 78 CPDGWLRYSDSCYFIETESLGFAKAERKCHDKQATLFVANSMEEWDAVRDHAEKSVLS-- 135
Query: 594 SRWIG 608
WIG
Sbjct: 136 --WIG 138
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +3
Query: 453 YFFSDTEATWQKALFACKDRDSNL-TVPARWEDKNLRNYLNKKSIKKYSRWIGGIYDSGD 629
YFF E +W A C ++L ++ +R E ++ + + WIG + D
Sbjct: 197 YFFIQREESWYTASEKCIGYGAHLASIHSRLE----LGFVQRLVPVNQTAWIG-VNDIQK 251
Query: 630 KEWKWGGELRKMHYQSFSKMKKMSPQELQWHCIAMIPEMQYRWAPRLCIXPRHYICKTKL 809
+ + + + + K K+ QE +C+ + + +W +LCI R ++CK K+
Sbjct: 252 ENVFRNSDGTPVDFYKWGK-KQPDNQEHNENCVEV--DHSGQWTDKLCIITRPFVCKKKI 308
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 607 EEYTTPAIRNGNGAASFGRCTTSPSQK*KRCHPRS--CSGTASL*SPKCSTDGR 762
+E P + +GNG S G C K K C R C +C TDGR
Sbjct: 344 DEAVCPVVCSGNGVFSGGICVCKSGFKGKECEMRHNWCEVADCNGRGRCDTDGR 397
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 607 EEYTTPAIRNGNGAASFGRCTTSPSQK*KRCHPRS--CSGTASL*SPKCSTDGR 762
+E P + +GNG S G C K K C R C +C TDGR
Sbjct: 286 DEAVCPVVCSGNGVFSGGICVCKSGFKGKECEMRHNWCEVADCNGRGRCDTDGR 339
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 607 EEYTTPAIRNGNGAASFGRCTTSPSQK*KRCHPRS--CSGTASL*SPKCSTDGR 762
+E P + +GNG S G C K K C R C +C TDGR
Sbjct: 468 DEAVCPVVCSGNGVFSGGICVCKSGFKGKECEMRHNWCEVADCNGRGRCDTDGR 521
>U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical
protein K10B2.3a protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS 596
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 597 RWIG 608
WIG
Sbjct: 138 SWIG 141
>U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical
protein K10B2.3b protein.
Length = 243
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS 596
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 597 RWIG 608
WIG
Sbjct: 138 SWIG 141
>DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin
proteoglycan-6 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS 596
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 597 RWIG 608
WIG
Sbjct: 138 SWIG 141
>AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical
protein R06B10.3 protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.4
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Frame = +3
Query: 441 GHSCYFFSDTEATWQKALFACKDRDSN--LTVPARWEDKNLRNYLNKKSIKKYSRWIGGI 614
G CY A++ A AC D +VP+ ++ L N + ++ WIG
Sbjct: 35 GKFCYVVHTGAASFHDAEKACYDYGGYHLASVPSMIDNNFLYNLSSNSNVWANYFWIGLT 94
Query: 615 YDSGDKEWKW--GGELRKMHYQSFSKMKKMSPQELQWHCIAMIPEMQYRWAPRLCIXPRH 788
+ D W+W G +L M++ S S +C AM RW + C P
Sbjct: 95 DMTADGSWEWIDGLDLVFMNWASSS---------TAGYCGAM-RAADARWQAQDCTKPYP 144
Query: 789 YICKTKLLKMP 821
+ C L P
Sbjct: 145 FFCYGPALGAP 155
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 393 NSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVP 533
+S + CP + I SCY F T W A C + +S T+P
Sbjct: 44 SSVPATATCPKNSIYYMGSCYVFDTTLRNWNDAALYCNNMNS-ATLP 89
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 393 NSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVP 533
+S + CP + I SCY F T W A C + +S T+P
Sbjct: 44 SSVPATATCPKNSIYYMGSCYVFDTTLRNWNDAALYCNNMNS-ATLP 89
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 537 RWEDKNLRNYLNKKSIKKYSRW--IGGIYDSGDKEWKWGGELRKMHYQSFSKMKKMSPQE 710
+W++++ +Y+ SI SRW IGG+ D+ + K + R +YQ F ++ +
Sbjct: 478 KWKEQSCTHYV---SIILCSRWYAIGGVDDAAKRFMKGACDHRGRYYQDFYRLLFQNEHY 534
Query: 711 LQW 719
W
Sbjct: 535 EDW 537
>U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical
protein F52E1.2 protein.
Length = 204
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL-TVPARWEDKNLRNYLNKKSIKKY 593
CP + L CY D T+ A AC + + L T+ + E+ LR + ++
Sbjct: 66 CPTGWQYLNSKCYKKFDAAVTYAGATSACAAQGAELVTIDSFDENDALRKAFDTNALVDE 125
Query: 594 SR--WIGGIYDSGDKEWKW 644
++ WIG SG W+W
Sbjct: 126 TKETWIGLKSLSG--AWQW 142
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 537 RWEDKNLRNYLNKKSIKKYSRW--IGGIYDSGDKEWKWGGELRKMHYQSFSKMKKMSPQE 710
+W++++ +Y+ SI SRW IGG+ D+ + K + R +YQ F ++ +
Sbjct: 478 KWKEQSCTHYV---SIILCSRWYAIGGVDDAAKRFMKGACDHRGRYYQDFYRLLFQNEHY 534
Query: 711 LQW 719
W
Sbjct: 535 EDW 537
>U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical
protein C25B8.4c protein.
Length = 145
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 530
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 58 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 95
>U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical
protein C25B8.4b protein.
Length = 248
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 530
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 94 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 131
>U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical
protein C25B8.4a protein.
Length = 212
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 530
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 58 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 95
>AL031630-7|CAA20982.1| 158|Caenorhabditis elegans Hypothetical
protein Y38H6C.8 protein.
Length = 158
Score = 28.3 bits (60), Expect = 7.2
Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Frame = +3
Query: 417 CPPSFIRLGHSCYFFSDTEATWQKALFAC-KDRDSNLTVPARWEDKNLRNYL--NKKSIK 587
C P + G SCY F+ ++ A C K +L D N L N
Sbjct: 18 CVPGDVGFGDSCYSFNRVHGKFKDANDLCVKMFGGSLVKITNIIDNNWMQKLAVNHLDAD 77
Query: 588 KYSRWIGGIYDSGDKEWKW--GGELRKMHYQSFSKMKKMSPQELQWHCIAMIPEMQYRWA 761
S WIG + W W G +R FS P E HC M+ +W
Sbjct: 78 YNSFWIGASDAAHYTNWTWIDGSPMR------FSNWGPGQPLE-DRHCGTMLISTG-KWF 129
Query: 762 PRLCIXPRHYICK 800
++C ++C+
Sbjct: 130 SQVCDERIQFLCQ 142
>L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical
protein F09G8.8 protein.
Length = 639
Score = 25.4 bits (53), Expect(2) = 7.9
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 531 PARWEDKNLR-NYLNKKSIKKYSRWIGGIYDSGDKEWKWGGELRKMHYQSFSKMKKMSPQ 707
P E+ N Y ++ KK+ W+ G+ ++ W G K +K+ K S
Sbjct: 547 PENQENPNYDIGYYYDQATKKFI-WVNGVTNNPYSNWATGHPDVKQGDCVMAKLLKDSKN 605
Query: 708 ELQWHCIAMIPE 743
+ +W+ ++ E
Sbjct: 606 DFRWNSVSCTSE 617
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +3
Query: 450 CYFFSDTEATWQKALFAC 503
C+F + +A+W + F C
Sbjct: 495 CFFPTKIDASWTASKFEC 512
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 387 QRNSTKMSYVCPPSFIRLGH----SCYFFSDTEATWQKALFACKDRDS 518
+ N++ + CP + + GH SC+ F + T+ +A+ C++ D+
Sbjct: 2689 ESNTSLIEGDCPAGWFQAGHEEFKSCFLFVPSAVTFSRAVEYCEELDA 2736
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,968,899
Number of Sequences: 27780
Number of extensions: 395569
Number of successful extensions: 1161
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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