Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G20
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.27 
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    27   0.47 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.7  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   7.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   7.7  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 17/71 (23%), Positives = 40/71 (56%)
 Frame = -3

Query: 347 QTACGGGGSQTKLLPGSERRGQRRPHECREGHR*QHPGRQQESAGLERGRRLQEPHRERR 168
           Q + G GG++ +     ++R +RR  E ++  + Q   +QQ+    ++ R+ Q+  +++R
Sbjct: 160 QQSSGQGGNR-ETARKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQR 218

Query: 167 VQRCTKQELPE 135
            Q+  +Q+L +
Sbjct: 219 QQQPQQQQLQQ 229



 Score = 27.5 bits (58), Expect = 0.36
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -3

Query: 296 ERRGQRR-PHECREGHR*QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQELPEAI 129
           +++G+R  P + R+  + Q P +QQ+    ++  + Q P ++R  QR  K   PE I
Sbjct: 445 QQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQR--KPAKPELI 499



 Score = 25.4 bits (53), Expect = 1.4
 Identities = 15/67 (22%), Positives = 32/67 (47%)
 Frame = -3

Query: 347 QTACGGGGSQTKLLPGSERRGQRRPHECREGHR*QHPGRQQESAGLERGRRLQEPHRERR 168
           QTA      Q+    G+    ++R    R   R +   +QQ+    ++ ++ Q+  R+++
Sbjct: 152 QTAANATLQQSSGQGGNRETARKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQ 211

Query: 167 VQRCTKQ 147
            Q+C +Q
Sbjct: 212 -QQCQQQ 217


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 292 GAGSDDLMSVERDTVNSIQDDSRR--VRGLREGGD 194
           GAGSDD +S   D     +DD+      G  EGGD
Sbjct: 114 GAGSDDAVSGADDETEESKDDAEEDSEEGGEEGGD 148


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 159 LYKAGATRGDPWTTLVLYWDSELTP 85
           L  AG +  DP T   + W S L P
Sbjct: 184 LLPAGVSLDDPETQSAIKWSSHLDP 208


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 104 QYSTSVVHGSPLVAPALY 157
           QY   +V G P+V P LY
Sbjct: 183 QYKYLIVTGKPIVFPKLY 200


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 143 LPEAIRGPHWCCTGTAN 93
           +P+AI  PH C T +A+
Sbjct: 451 MPDAIAPPHTCFTSSAD 467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,290
Number of Sequences: 2352
Number of extensions: 7893
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)