Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_G19
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 196 2e-50
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 183 1e-46
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 181 6e-46
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 163 2e-40
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 76 4e-14
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 52 8e-07
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 46 5e-05
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 42 8e-04
07_03_0951 - 22836167-22836358,22836455-22837213 33 0.22
11_01_0366 + 2793732-2793838,2793944-2794979 31 1.1
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 29 4.6
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 6.1
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049... 28 8.1
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 196 bits (477), Expect = 2e-50
Identities = 109/243 (44%), Positives = 148/243 (60%), Gaps = 12/243 (4%)
Frame = +2
Query: 149 ADNSVDPPAKKRKLNT----------GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLG 298
A++S D PAKK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 299 HDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVI 478
+ MRR+ +S+VL+SGL GLG EIAKN+ L GVKS+TLHD N + DLS F+LSE I
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDI 245
Query: 479 GQNKALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLTGASWAEQERVAAF--THA 652
G+N+A+ +L ELN+ V + T LT + L KF+ VV T S + + H
Sbjct: 246 GKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSKFQAVVFTDISLDKAFEFDDYCRNHQ 305
Query: 653 NNIALVIADTRGLFSQVFCDFGPXFTVLDVNGENPXSXMIAXITQDYEAXVTCLDDTRHG 832
+I+ + A+ GLF VFCDFGP FTVLDV+GE P + +IA I+ D A ++C+DD R
Sbjct: 306 PSISFIKAEVCGLFGSVFCDFGPKFTVLDVDGEEPHTGIIASISNDNPAMISCVDDERLE 365
Query: 833 LED 841
+D
Sbjct: 366 FQD 368
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 183 bits (446), Expect = 1e-46
Identities = 99/213 (46%), Positives = 135/213 (63%), Gaps = 17/213 (7%)
Frame = +2
Query: 254 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 433
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSVTLHDD N
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 434 VADLSSQFYLSETVIGQNKALTSCEQLSELNHYVPTTAYTGPLTEDFLRKF--------- 586
+ DLSS F+L+E +GQN+A T ++L ELN+ V + TG LT++ L F
Sbjct: 138 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQLPQIPLLL 197
Query: 587 ------RVVVLTGASWAEQERVAAFTHANN--IALVIADTRGLFSQVFCDFGPXFTVLDV 742
+ VV T S + ++ H + IA + ++ RGLF VFCDFGP FTVLDV
Sbjct: 198 DIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKSEIRGLFGSVFCDFGPEFTVLDV 257
Query: 743 NGENPXSXMIAXITQDYEAXVTCLDDTRHGLED 841
+GE P + ++A I+ D A V+C+DD R +D
Sbjct: 258 DGEEPHTGIVASISNDNPALVSCVDDERLEFQD 290
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 181 bits (441), Expect = 6e-46
Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 17/213 (7%)
Frame = +2
Query: 254 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 433
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSV LHDD N
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 434 VADLSSQFYLSETVIGQNKALTSCEQLSELNHYVPTTAYTGPLTEDFLRKF--------- 586
+ DLSS F+L+E +GQN+A T ++L ELN+ V + TG LT++ L F
Sbjct: 215 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQLPQIPLLL 274
Query: 587 ------RVVVLTGASWAEQERVAAFTHANN--IALVIADTRGLFSQVFCDFGPXFTVLDV 742
+ VV T S + ++ H + IA + ++ RGLF VFCDFGP FTVLDV
Sbjct: 275 DIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKSEIRGLFGSVFCDFGPEFTVLDV 334
Query: 743 NGENPXSXMIAXITQDYEAXVTCLDDTRHGLED 841
+GE P + ++A I+ D A V+C+DD R +D
Sbjct: 335 DGEEPHTGIVASISNDNPALVSCVDDERLEFQD 367
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 163 bits (396), Expect = 2e-40
Identities = 109/259 (42%), Positives = 142/259 (54%), Gaps = 35/259 (13%)
Frame = +2
Query: 170 PAKKRKLNTGEAHSNNSA---MANNGAR---VEDEIDESLYSRQLYVLGHDAMRRMASSD 331
P KR T + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 332 VLISGLGGLGV-------------------EIA--------KNVILGGVKSVTLHDDKNC 430
VL+SGL GLG +IA KN+ L GVKSVTLHD KN
Sbjct: 76 VLVSGLNGLGAEIGSSFYPLTLFVLCFFLFQIAFNCLLITTKNLALAGVKSVTLHDVKNV 135
Query: 431 TVADLSSQFYLSETVIGQNKALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLT-- 604
+ DLS+ F+LSE IG+N+A +L ELN+ V +A T LT D L KF+ VV T
Sbjct: 136 EMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSKFQAVVFTDI 195
Query: 605 GASWAEQERVAAFTHANNIALVIADTRGLFSQVFCDFGPXFTVLDVNGENPXSXMIAXIT 784
G A + +H I+ + A+ GLF VFCDFGP FTVLDV+GE+P + +IA I+
Sbjct: 196 GLDKAYEFDDYCHSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGEDPHTGIIASIS 255
Query: 785 QDYEAXVTCLDDTRHGLED 841
D A V+C+DD R +D
Sbjct: 256 NDNPALVSCVDDERLEFQD 274
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 75.8 bits (178), Expect = 4e-14
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Frame = +2
Query: 236 GARVEDEI---DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSV 406
G E+E+ + +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L GV S+
Sbjct: 4 GGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSL 63
Query: 407 TLHDDKNCTVADLSSQFYL--SETVI-GQNKALTSCEQLSELNHYVPTTAYTGP---LTE 568
+L DD T DL++ F + E++ G+++A CE L + N V G +
Sbjct: 64 SLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKGDPSLIDG 123
Query: 569 DFLRKFRVVVLTGA 610
+FL KF ++V++ A
Sbjct: 124 EFLDKFDIIVVSCA 137
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 51.6 bits (118), Expect = 8e-07
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +2
Query: 323 SSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTS 502
++ VL+ G GG+G E+ K + L G + + + D V++L+ QF ++ +GQ+KA +
Sbjct: 17 AAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVA 76
Query: 503 CEQLSELNHYVPTTAYTGPLTE-----DFLRKFRVVVLTGASWAEQER-VAAFTHANNIA 664
+ + + + T+Y + + +F ++F VVL G + R V A +
Sbjct: 77 RDAVLKFRPNINITSYHANVKDAQFNVEFFKQFN-VVLNGLDNLDARRHVNRLCLAAEVP 135
Query: 665 LVIADTRGLFSQV 703
LV + T G QV
Sbjct: 136 LVESGTTGFLGQV 148
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 45.6 bits (103), Expect = 5e-05
Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Frame = +2
Query: 272 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHD-DKNCTVADLS 448
Y RQL + G + + + + G G E KN++LGGV SVT+ D D C
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDVDAEC------ 69
Query: 449 SQFYLSETVIGQNKALTSCEQLSELNHYVPTT-AYTGPL-----TEDFLRKFRVVVLTGA 610
+GQ++A + C L ELN V PL F +F VV+ T
Sbjct: 70 ---------LGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVIATQL 120
Query: 611 SWAEQERVAAFTHANNIALVIADTRGL 691
++ NI LV A + GL
Sbjct: 121 PERSLLKLDDICRKANIVLVAARSYGL 147
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/84 (25%), Positives = 43/84 (51%)
Frame = +2
Query: 245 VEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDK 424
++DE+ +R + G ++ +++ S V++ GLGG+G A ++ GV + L D
Sbjct: 69 LDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFD 128
Query: 425 NCTVADLSSQFYLSETVIGQNKAL 496
+++ L+ + +G KAL
Sbjct: 129 QVSLSSLNRHAVATRDDVGTPKAL 152
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 33.5 bits (73), Expect = 0.22
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = -1
Query: 372 AISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPV 193
A+S P P P +S RR SW S R + S+ S T AP +ELF S
Sbjct: 61 ALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDT-AP----SELFPTMSRE 115
Query: 192 FSFRFFAGGSTELSATSALDIG 127
FS A + +A +A + G
Sbjct: 116 FSAMVAAAANANAAAAAAANGG 137
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 281 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGG-VKSVTL 412
+L + HD R ++ VL+ G G +GVE+A +++ K VTL
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTL 159
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +2
Query: 275 SRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQ 454
S+QL V ++ + DVL + G IA ++ G VK L DK+ ++
Sbjct: 388 SKQLSVTNVKTLKM--NDDVLAVTISPTGNHIAVALLDGAVKFSNLEQDKHKQISIFRQS 445
Query: 455 FYLSETVIGQNKALTSCE 508
Y+ + +I N L SC+
Sbjct: 446 VYMGKAII-VNIFLASCK 462
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 332 VLISGLGGLGVEIAKNVILGGVK 400
VLI G G +GVEIAK + GVK
Sbjct: 117 VLILGFGAIGVEIAKRIRPFGVK 139
>02_05_0256 +
27201483-27202499,27203297-27203375,27204617-27204946,
27205029-27205198
Length = 531
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 620 EQERVAAFTHANNIALVIADTRGLFSQVFCDFGPXF 727
E+ER AAF +N+ IAD + +VF G F
Sbjct: 308 ERERKAAFERLDNLGRCIADVESIGEKVFRALGMAF 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,651,269
Number of Sequences: 37544
Number of extensions: 471519
Number of successful extensions: 1407
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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