Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G18
         (683 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5619F Cluster: PREDICTED: similar to CG6604-PA;...    45   0.002
UniRef50_A6XAC6 Cluster: Immune related protein; n=1; Spodoptera...    35   2.1  

>UniRef50_UPI0000D5619F Cluster: PREDICTED: similar to CG6604-PA;
           n=4; Endopterygota|Rep: PREDICTED: similar to CG6604-PA
           - Tribolium castaneum
          Length = 594

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +1

Query: 340 KSAGDRMVAEEGKTRATDFSIAAIMARSAVERRSPDARSPP 462
           +SA   ++A   KTRATDFSIAAIMAR AV     DAR  P
Sbjct: 86  ESAAAGLLAPTAKTRATDFSIAAIMARGAVAPPDADARELP 126


>UniRef50_A6XAC6 Cluster: Immune related protein; n=1; Spodoptera
           frugiperda|Rep: Immune related protein - Spodoptera
           frugiperda (Fall armyworm)
          Length = 702

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +2

Query: 137 ISQFSIDLETLKCHSRRGVFVCRNLKKKQNMIKTIRCHGRCWCDG 271
           +S+FS DL  +KC +R    +CR+L  K    K    +G+CWC G
Sbjct: 476 VSKFSEDLTKVKCTNRVCDRMCRSLDYKGGNCK----NGKCWCYG 516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,908,106
Number of Sequences: 1657284
Number of extensions: 10633612
Number of successful extensions: 27906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27897
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)