Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G18
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 238 CFNHILFFF*VTTYE 194
           C N ++F++ ++TYE
Sbjct: 391 CLNTLIFYYHISTYE 405


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 394 FSIAAIMARSAVERRSPDARSPPHTACLISP 486
           + +  I AR    + SP   +  HT+C+ +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIPTP 361


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 394 FSIAAIMARSAVERRSPDARSPPHTACLISP 486
           + +  I AR    + SP   +  HT+C+ +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIPTP 361


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 283 SSPLTITPTTSVTSYCFNHILFFF 212
           +S +T+    +   Y F HI FFF
Sbjct: 55  TSSVTLHVCFNSYMYAFTHIFFFF 78


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 405 GHHGSQRGRTAQSGRAFP 458
           GHH  Q    A + R+FP
Sbjct: 23  GHHHEQSAAAAAAYRSFP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,617
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)