Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_G17
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 185 1e-47
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 175 2e-44
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 41 5e-04
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 32 0.21
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 29 2.6
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 28 3.4
07_03_0584 - 19690474-19690589,19690763-19690909,19691068-196911... 28 3.4
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 28 3.4
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 3.4
07_03_1607 + 28119886-28120239,28121097-28121153,28121377-281214... 28 4.5
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 4.5
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 6.0
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 27 6.0
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 27 6.0
07_01_0328 - 2291696-2291951,2292462-2293708 27 6.0
01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934... 27 7.9
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 185 bits (451), Expect = 1e-47
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = +3
Query: 90 EEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLV 269
+++ M T++IV TRLLDNE +++K E+ R + E+++ +KIKEN EKIK+NK LPYLV
Sbjct: 9 DQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLV 68
Query: 270 SNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 446
N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPVIGLVD EKLKPGD
Sbjct: 69 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGD 128
Query: 447 LVXVNKDSYLIL 482
LV VNKDSYLIL
Sbjct: 129 LVGVNKDSYLIL 140
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 175 bits (425), Expect = 2e-44
Identities = 85/135 (62%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Frame = +3
Query: 81 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 260
A +++ M T++IV +RLLDNEI+ E+ R + EL++ +KIKEN EKIK+NK LP
Sbjct: 6 AEDDQLASMSTEDIVRASRLLDNEIR---DELQRTNLELESFKEKIKENQEKIKLNKQLP 62
Query: 261 YLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLK 437
YLV N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLK
Sbjct: 63 YLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLK 122
Query: 438 PGDLVXVNKDSYLIL 482
PGDLV VNKDSYLIL
Sbjct: 123 PGDLVGVNKDSYLIL 137
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 41.1 bits (92), Expect = 5e-04
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 150 EIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEE-EDGA 326
E+ +K + + E N ++ + I+ N+ YLV V+ +++ P++E ED
Sbjct: 16 EVDRLKKRIRTLEMEETKLNQHMERVIQGIEANEA--YLVGMVLRIMEKGPEDETAEDDC 73
Query: 327 VVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVXVNKDS 470
V QRK F P+ G+V KLKPGDL+ V+ S
Sbjct: 74 DVGFHLQRK------------IIFRPIAGVVYPSKLKPGDLIGVDSTS 109
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +3
Query: 93 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE-----NTEKIKVNKTL 257
E L+ DE+ S + + + + SEV ++ H L N +I+ N + + +K
Sbjct: 789 EKLKQAWDELNSESENIKQALDVKNSEVDKLKHALDENNSEIENLKHTLNEKNSETDKLK 848
Query: 258 PYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 422
+ + +E+ ++ + + A+ DL Q + + + S Q L +I L+D
Sbjct: 849 QDIDATYMEMENLKYEIASRESAITDLREQVEHLSSQVTHS--QKLQLDIISLID 901
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 93 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 224
E L+ +DE R + ++ +K+ + E+MR+ E Q +++KE
Sbjct: 161 EKLQKTSDEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKE 204
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 36 ATTLSSKSIWXXGAXALSEEVLRMPTDEIVSRTRLLDNEIKI 161
+++ S S+W + LSE VL D+I+++ L D KI
Sbjct: 54 SSSSSGDSLWQWRSQGLSEVVLSWSVDQILNKDLLRDKVAKI 95
>07_03_0584 -
19690474-19690589,19690763-19690909,19691068-19691116,
19691240-19691365,19691473-19692651
Length = 538
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 213 KIKENTEKIKVNKTLPY-LVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIK 374
KIK ++IK K L L+ N++E + EEE A D + C++ K
Sbjct: 195 KIKSTLQRIKDRKALSVDLLDNLVEFTNRWTIEEETAAAAASADPPQNPICSIAK 249
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 45 LSSKSIWXXGAXALSEEVLRMPTDE---IVSRTRLLDNEIKIMKSEVMRISHELQAQNDK 215
L+SK + + +L+E L+ + + SR L+NEIK+++S++ ++ EL +
Sbjct: 824 LTSKLVASEKSNSLAETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTAELDDERQN 883
Query: 216 IKENTEKIK 242
+E+ + +
Sbjct: 884 HQEDITRYR 892
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 195 LQAQNDKIKENT-EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVI 371
L+A+ +K+K+NT E+ K L +L+ I+ D + E V +L S+ + ++
Sbjct: 195 LEAEIEKLKQNTEEQAKEISDLKHLLDKAIK--DKEATRVELSSDVANLSSENENLKLLV 252
Query: 372 KTSTRQ 389
+T+ R+
Sbjct: 253 ETTERE 258
>07_03_1607 +
28119886-28120239,28121097-28121153,28121377-28121464,
28121557-28121686,28121783-28121962,28122291-28122759
Length = 425
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 357 KCAVIKTSTRQTYFLPVIGLVDA 425
KC +++ T QTY+L IGL DA
Sbjct: 146 KCFIVRNRTTQTYYL-YIGLTDA 167
>05_06_0005 +
24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 297 DPQEEEEDGAVVDLDSQ---RKGKCAVIKTS-TRQTYFLPVIGLVDAEKLKPGDLVXVNK 464
+ +EEEE+ D D +GK + T +++ LP +G+V E+L +L K
Sbjct: 70 EEEEEEEEMFASDGDDDGFFTEGKAENVNLKRTERSHPLPFLGIVKEEELSGDELEEFIK 129
Query: 465 DSY 473
D Y
Sbjct: 130 DRY 132
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 279 IELLDVDPQEEEEDGAVVDL 338
++L D D +EEEE+GAV D+
Sbjct: 236 LDLEDFDDEEEEEEGAVGDI 255
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 279 IELLDVDPQEEEEDGAVVDL 338
++L D D +EEEE+GAV D+
Sbjct: 225 LDLEDFDDEEEEEEGAVGDI 244
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3
Query: 84 LSEEVLRMPTDE---IVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 254
L E+L + + E ++S+ + L++ +KI+ + + E+ DK++ + N+
Sbjct: 1414 LEHEILLLNSSEEGRLMSQIKELNDNLKIISIDKGNLEEEILKLTDKLEMAVALAEENEA 1473
Query: 255 LPYLVSNVIELLDVDPQEEEEDGAVVD 335
E+ V +E+EE+ +++
Sbjct: 1474 ASIEARQAAEISKVYAEEKEEEVRILE 1500
>07_01_0328 - 2291696-2291951,2292462-2293708
Length = 500
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 144 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 251
D +++ + RIS LQ D IKE E++K NK
Sbjct: 455 DIKLETCEEVAKRISEMLQGIADAIKELREEVKANK 490
>01_06_0786 -
31992357-31992441,31992632-31992752,31993371-31993465,
31993595-31993716,31994217-31994354,31994564-31994727,
31994835-31994955,31995049-31995148,31995329-31995412,
31996082-31996143,31996246-31996317,31996447-31996506
Length = 407
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 315 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKL 434
E+G + L+ R+ + +I +R +LP+ GL D KL
Sbjct: 44 EEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKL 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,524
Number of Sequences: 37544
Number of extensions: 163606
Number of successful extensions: 530
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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