Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_G17
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 190 3e-49
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.0
U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical p... 29 1.3
U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical p... 29 1.3
U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical pr... 29 1.8
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 1.8
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 1.8
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 2.3
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 29 2.3
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 29 2.3
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 29 2.3
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 29 2.3
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 4.1
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 27 5.4
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 27 5.4
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 5.4
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 5.4
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 5.4
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 27 5.4
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 5.4
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 27 7.1
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 27 7.1
U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical p... 27 7.1
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 27 7.1
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 27 9.4
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 27 9.4
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 27 9.4
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 190 bits (464), Expect = 3e-49
Identities = 94/134 (70%), Positives = 113/134 (84%)
Frame = +3
Query: 81 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 260
A+ EE+L+M T+++ SRT LLDNEI+IM+SEV RI+H ++IKENTE+IKVNKTLP
Sbjct: 21 AIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLP 80
Query: 261 YLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 440
YLVSNV+ELLD++ EEE GA VDLD+Q K KCAVIKTSTR TYFLPV+GLVD ++LKP
Sbjct: 81 YLVSNVVELLDLEDNTEEE-GANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDELKP 138
Query: 441 GDLVXVNKDSYLIL 482
GDLV VNKDSYLIL
Sbjct: 139 GDLVGVNKDSYLIL 152
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +3
Query: 81 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 260
AL E L++ T+ L +I+++KSE R+S ++Q ++ +N EK+ ++ L
Sbjct: 280 ALQSEKLKL-TEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLL 338
Query: 261 YLVSNVIELLDVDPQEEEE 317
+E+ D+ E +
Sbjct: 339 LETRYQLEVDDLKKSFESD 357
>U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical
protein B0280.1b protein.
Length = 325
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 KTNHHLXMATTLSSKSI-WXXGAXALSEEVLRMPTDEIVS 128
K ++H MA L I W A LS+++ RM T+EIV+
Sbjct: 40 KNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVN 79
>U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical
protein B0280.1a protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 KTNHHLXMATTLSSKSI-WXXGAXALSEEVLRMPTDEIVS 128
K ++H MA L I W A LS+++ RM T+EIV+
Sbjct: 40 KNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVN 79
>U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical
protein T16A1.8 protein.
Length = 368
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +3
Query: 51 SKSIWXXGAXALSEEVLRMPTDEIV---SRTRLLDNEIKIMKSEVMRISHELQAQNDKIK 221
SKSI L V ++ +EIV T +DN++ K+ + I H ++ N ++K
Sbjct: 179 SKSILIQNLEELQFNVSKVTLNEIVLVNCSTITIDNQVISDKNLNLFIKHWIKGSNCQLK 238
Query: 222 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFL 401
I+ + L ++ ++ E + +EE++ ++ K V+ + T F+
Sbjct: 239 SFEYHIRPTERLRFVEVSLFEGIGYMEKEEDDHWKRFEIKRNDGTKATVLLSKTDYISFV 298
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 261 YLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 440
+L++ E +DV +EEEED + ++ + + K K S + F P+I A +L+
Sbjct: 31 HLLAEDEEQIDVVHEEEEEDMEEMKMEIEMQSKSLHQKPSGLRRSFRPLI----ASELRS 86
Query: 441 GDLVXVNKDSYL 476
G + + DS L
Sbjct: 87 GGIHKTSSDSNL 98
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 102 RMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 254
+M DE++ RT++ I ++ + ++++ EL+ + KIKE+ E K T
Sbjct: 1598 QMSDDEVI-RTKVAVTAIDQLRKKWLKMNEELKKMHQKIKESIEFTKFVST 1647
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 108 PTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 251
P DEIV+ + E+K +++ E+Q + D I ++ +++ V K
Sbjct: 521 PKDEIVAESEKKLKELKERNKQLVMEKSEIQRELDNINDHLDQVLVEK 568
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 93 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 233
EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 20 EVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 93 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 233
EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 20 EVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 93 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 233
EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 20 EVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 117 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 245
E + + ++L I+ +K+E IS E+Q QND +E+I++
Sbjct: 141 EQIPQIKMLRLTIERLKNEKNEISEEIQKQNDAFAVFSEEIQI 183
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 141 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 248
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 141 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 248
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 84 LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPY 263
LS+E +E+ E K + M L +D + + + K KT P
Sbjct: 1125 LSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTDPE 1181
Query: 264 LVSNVIELLDVDPQEEEEDGAVV 332
L + E+LDV + + EDG ++
Sbjct: 1182 LAEKINEMLDVILEYKNEDGELI 1204
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 84 LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPY 263
LS+E +E+ E K + M L +D + + + K KT P
Sbjct: 1125 LSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTDPE 1181
Query: 264 LVSNVIELLDVDPQEEEEDGAVV 332
L + E+LDV + + EDG ++
Sbjct: 1182 LAEKINEMLDVILEYKNEDGELI 1204
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 84 LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPY 263
LS+E +E+ E K + M L +D + + + K KT P
Sbjct: 1125 LSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTDPE 1181
Query: 264 LVSNVIELLDVDPQEEEEDGAVV 332
L + E+LDV + + EDG ++
Sbjct: 1182 LAEKINEMLDVILEYKNEDGELI 1204
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 21 HHLXMATTLSSKSIWXXG-AXALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 197
H L A K++W L E +P + T + NE +++ S + HE+
Sbjct: 233 HGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEMLIHEV 292
Query: 198 QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 320
++K ++ ++ KTL L + +D D E D
Sbjct: 293 ADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 333
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 21 HHLXMATTLSSKSIWXXG-AXALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 197
H L A K++W L E +P + T + NE +++ S + HE+
Sbjct: 249 HGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEMLIHEV 308
Query: 198 QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 320
++K ++ ++ KTL L + +D D E D
Sbjct: 309 ADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 111 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 275
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 276 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 389
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 156 KIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 254
+I+++E M++ HE+ + N + + EKI + KT
Sbjct: 820 RIVENEKMKVQHEIDSLNSTNQLSAEKIDMLKT 852
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 111 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 275
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 276 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 389
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 21 HHLXMATTLSSKSIWXXG-AXALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 197
H L A K++W L E +P + T + NE +++ S + HE+
Sbjct: 249 HGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEMLIHEV 308
Query: 198 QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 320
++K ++ ++ KTL L + +D D E D
Sbjct: 309 ADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 111 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 275
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 547 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 606
Query: 276 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 389
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 607 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 645
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 117 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI 281
+++ + R LDN + + EL K+KE ++K+K N LV N +
Sbjct: 467 QVIQKMRNLDNASVENIKGIPSVVSELLQNISKVKEVSDKMKENSNNKTLVMNAL 521
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 184 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 243
Query: 306 EEEE 317
E +E
Sbjct: 244 EIKE 247
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 306 EEEE 317
E +E
Sbjct: 252 EIKE 255
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 306 EEEE 317
E +E
Sbjct: 252 EIKE 255
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 184 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 243
Query: 306 EEEE 317
E +E
Sbjct: 244 EIKE 247
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 306 EEEE 317
E +E
Sbjct: 252 EIKE 255
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 306 EEEE 317
E +E
Sbjct: 252 EIKE 255
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 305
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 211 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 270
Query: 306 EEEE 317
E +E
Sbjct: 271 EIKE 274
>U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical
protein EEED8.2 protein.
Length = 299
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 102 RMPTDEIVSRTRLLDNEIKIMKSE---VMRISHELQAQNDKIKENTEKIKVNK 251
+ P E VS L +E+K ++ E + + +L+ ND++K++ EK+ N+
Sbjct: 28 KSPELEEVSTVSDLQDELKSLRLENKDLYSLMEQLKKDNDEMKKSLEKVMKNQ 80
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 291 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 386
D D +EEEED + D++S R K V T+++
Sbjct: 528 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 559
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 291 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 386
D D +EEEED + D++S R K V T+++
Sbjct: 816 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 847
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 159 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 302
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 159 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 302
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 219 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLD 341
KEN K +NK L + N+ E+ Q E E+G + +LD
Sbjct: 455 KENARKY-LNKALNSVSDNINEIYMYYVQFEREEGTLAELD 494
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 26.6 bits (56), Expect = 9.4
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 153 IKIMKSEVMRIS--HELQAQNDKIKENTEK-IKVNKTLPYLVSNVIELLDVDPQEEEEDG 323
IK++ + ++ E + ++K++++ +K +K + P LV N L + +E+EE+
Sbjct: 74 IKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEP-LVKN----LKIAKKEQEEEN 128
Query: 324 AVVDLDSQRKGKCAVIKTSTRQ 389
DL+S + A K S RQ
Sbjct: 129 PKTDLESHKDEAEAKKKESRRQ 150
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 159 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 302
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,976,518
Number of Sequences: 27780
Number of extensions: 154800
Number of successful extensions: 642
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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