Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G11
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0967 + 21318974-21319140,21321677-21321821,21322045-213221...   243   2e-64
03_06_0598 + 34977063-34977220,34977957-34978101,34978362-349784...   216   2e-56
05_05_0107 + 22442118-22443437,22443775-22443873                       29   4.6  

>04_03_0967 +
           21318974-21319140,21321677-21321821,21322045-21322164,
           21322261-21322395,21322503-21322564,21322804-21322879,
           21323555-21323656,21323732-21323848,21324403-21324461,
           21324927-21325101,21325233-21325367,21325429-21325545,
           21325686-21325794,21325939-21326051,21326561-21326615,
           21326657-21326769
          Length = 599

 Score =  243 bits (594), Expect = 2e-64
 Identities = 114/188 (60%), Positives = 143/188 (76%)
 Frame = +3

Query: 273 ARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMKF 452
           A  N +   LLTD YQ +MAYAYWK+GK  D AVFDL+FR NPF GEFT+FAGLEEC+KF
Sbjct: 23  APTNPMATALLTDQYQFSMAYAYWKAGKHADRAVFDLYFRKNPFGGEFTVFAGLEECIKF 82

Query: 453 LENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVEG 632
           + NF ++  DI +L+  +P   E  F+ YL++  C D+ V +I EGSVVFP+VPL+RVEG
Sbjct: 83  IANFKFTEDDILFLQSVMPM-CEDAFFDYLRKTDCSDVEVYSIPEGSVVFPKVPLMRVEG 141

Query: 633 PLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRXAQGPDGGLSASKYA 812
           P+ V QLLET  + L+N+ASL+ TNAAR+R VAGK+  LLEFGLR AQGPDG +SASKY 
Sbjct: 142 PVAVVQLLETPFVNLINYASLVTTNAARHRHVAGKSKVLLEFGLRRAQGPDGAISASKYC 201

Query: 813 YIGGFDGT 836
           ++GGFD T
Sbjct: 202 FMGGFDAT 209


>03_06_0598 +
           34977063-34977220,34977957-34978101,34978362-34978481,
           34978640-34978774,34979138-34979213,34979398-34979450,
           34979594-34979695,34979848-34979964,34980170-34980228,
           34980810-34980984,34981628-34981762,34981855-34981953,
           34982143-34982251,34982981-34983093,34983206-34983265,
           34983821-34983835
          Length = 556

 Score =  216 bits (527), Expect = 2e-56
 Identities = 102/165 (61%), Positives = 129/165 (78%)
 Frame = +3

Query: 282 NGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMKFLEN 461
           N +V PLLTDLYQ TMAYAYWK+GK  D AVFDL+FR NPF GEFTIF GLEEC++F+ N
Sbjct: 23  NPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECIRFIAN 82

Query: 462 FHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVEGPLI 641
           F  ++++I +L+  +P   E  F+ YL  + C D+ V AI EGSVVFP+VPL+ +EGP+ 
Sbjct: 83  FKLTDTEITFLRSAMP-TCEDGFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIEGPVA 141

Query: 642 VAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRXAQ 776
           V QLLET  L+LVN+ASL+ TNAAR+R+VAGK+ +LLEFGLR AQ
Sbjct: 142 VIQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLRRAQ 186


>05_05_0107 + 22442118-22443437,22443775-22443873
          Length = 472

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 22/50 (44%), Positives = 24/50 (48%)
 Frame = -3

Query: 835 VPSNPPMYAYLDADSPPSGPCAXRSPNSSRDTFLPATIRYLAAFVAIKLA 686
           V S PP  A L A+SP S P    SP + RDT   A     AA VA   A
Sbjct: 367 VASAPPPAA-LPAESPESAPTKLSSPPALRDTAGNANHTAAAAAVAAAAA 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,444,460
Number of Sequences: 37544
Number of extensions: 395245
Number of successful extensions: 949
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)