Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G11
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-33|AAP13743.1|  238|Caenorhabditis elegans Hypothetical...   275   3e-74
AC024817-32|AAP13741.1|  543|Caenorhabditis elegans Hypothetical...   275   3e-74
AC024817-31|AAP13742.1|  563|Caenorhabditis elegans Hypothetical...   275   3e-74
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z72514-3|CAA96673.1|  741|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF025463-3|AAB71009.2|  403|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF025457-5|AAB70962.1|  235|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC024775-4|AAK68453.4|   88|Caenorhabditis elegans Hypothetical ...    28   7.2  

>AC024817-33|AAP13743.1|  238|Caenorhabditis elegans Hypothetical
           protein Y54G2A.17c protein.
          Length = 238

 Score =  275 bits (674), Expect = 3e-74
 Identities = 123/189 (65%), Positives = 153/189 (80%)
 Frame = +3

Query: 270 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 449
           M  Q+ +VQPLLTD YQITM YAYWK+G  N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 1   MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 60

Query: 450 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 629
           F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L    + + A+ EGSVVFP+VPLL + 
Sbjct: 61  FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 120

Query: 630 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRXAQGPDGGLSASKY 809
           GPL + QL+ET++L LVN+ASL+ATNAAR+R  +G  + LLEFGLR AQGP+GGL+ASKY
Sbjct: 121 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 180

Query: 810 AYIGGFDGT 836
            YIGGFD T
Sbjct: 181 CYIGGFDAT 189


>AC024817-32|AAP13741.1|  543|Caenorhabditis elegans Hypothetical
           protein Y54G2A.17a protein.
          Length = 543

 Score =  275 bits (674), Expect = 3e-74
 Identities = 123/189 (65%), Positives = 153/189 (80%)
 Frame = +3

Query: 270 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 449
           M  Q+ +VQPLLTD YQITM YAYWK+G  N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 1   MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 60

Query: 450 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 629
           F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L    + + A+ EGSVVFP+VPLL + 
Sbjct: 61  FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 120

Query: 630 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRXAQGPDGGLSASKY 809
           GPL + QL+ET++L LVN+ASL+ATNAAR+R  +G  + LLEFGLR AQGP+GGL+ASKY
Sbjct: 121 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 180

Query: 810 AYIGGFDGT 836
            YIGGFD T
Sbjct: 181 CYIGGFDAT 189


>AC024817-31|AAP13742.1|  563|Caenorhabditis elegans Hypothetical
           protein Y54G2A.17b protein.
          Length = 563

 Score =  275 bits (674), Expect = 3e-74
 Identities = 123/189 (65%), Positives = 153/189 (80%)
 Frame = +3

Query: 270 MARQNGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 449
           M  Q+ +VQPLLTD YQITM YAYWK+G  N+ AVFD+FFR NPFQGEFT+FAGLE+C++
Sbjct: 21  MNGQDSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLR 80

Query: 450 FLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVE 629
           F+ENF +S SDI Y+K+ LPEN EPEFY YL+ L    + + A+ EGSVVFP+VPLL + 
Sbjct: 81  FVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTIN 140

Query: 630 GPLIVAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRXAQGPDGGLSASKY 809
           GPL + QL+ET++L LVN+ASL+ATNAAR+R  +G  + LLEFGLR AQGP+GGL+ASKY
Sbjct: 141 GPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKY 200

Query: 810 AYIGGFDGT 836
            YIGGFD T
Sbjct: 201 CYIGGFDAT 209


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +3

Query: 429 GLEECMKFLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPR 608
           G++ C+ FL++      D K +K+ LP  ++P      + + C D+      EGS   P+
Sbjct: 260 GIKSCVNFLQD---PQRDAKSIKKELPVQVDPSTPRDNELMDCSDLSRWLFTEGSQTTPQ 316


>Z72514-3|CAA96673.1|  741|Caenorhabditis elegans Hypothetical
           protein T10B10.3 protein.
          Length = 741

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 438 ECMKFLENFHYSNSDIKYLKQT 503
           EC K +E+FH  N  ++YL  T
Sbjct: 335 ECFKVIESFHSDNMKLRYLVMT 356


>AF025463-3|AAB71009.2|  403|Caenorhabditis elegans Hypothetical
           protein K10B4.4 protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 629 RSAHCGTAIGDHSANISQLCQFDGHER 709
           RSA C T +GDH AN      F GH+R
Sbjct: 343 RSAFCRTILGDHIANF----VFKGHQR 365


>AF025457-5|AAB70962.1|  235|Caenorhabditis elegans Hypothetical
           protein C08E3.2 protein.
          Length = 235

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 738 FYRPPSDISQRSWPSNWQ 685
           FY  PSD +QR W  NW+
Sbjct: 44  FYYSPSDKNQRRWVFNWE 61


>AC024775-4|AAK68453.4|   88|Caenorhabditis elegans Hypothetical
           protein Y41D4A.3 protein.
          Length = 88

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 303 LTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 449
           +T  Y  T   +  KS + +D  + +LFF+T PF     I   +  C+K
Sbjct: 39  ITMFYFHTAYPSVHKSNRSDDFPIIELFFQTLPFINYLQIIQIILPCLK 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,401,416
Number of Sequences: 27780
Number of extensions: 380773
Number of successful extensions: 914
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)